Gene Plim_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3496 
Symbol 
ID9140214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4519890 
End bp4520348 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content54% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003631508 
Protein GI296123730 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACAAG TCAGGGCGTG CGGAGTCATC CTGTTTCGTA AAACTCCACA TCTGACCTAT 
CTTCTGCTGA AGCATCGGCA TCGTTTTGAC CTTCCCAAGG GGCATCTGGA AGAGGGTGAG
AACGATCTCC AATGTGCCCT GCGCGAGATG GAAGAAGAAA CCGGGATTCC CCGGACAGAT
GTCGTGCTTG ACCCCACTTT CAGTTACTCC GAGACCTATC ATCCCGTCGA AGCGCGCTTT
GGTCCCGAGC CTGTTGAAAA AACGCTGATG ATTTATCTGG GCTGGCTGAA TCGCGATCGG
CCACTGAAGC TCACGGAGCA TGTCGGTTAC GAGTGGCGAC TCTGGACGCC GCCTCATCAC
ATTCAGCGGT ACACGATCAA TCCGCTCCTG GCAAAAATTG AAGAACATTT TACCTCCAAT
CCGGAAGTGC TGCGTGTCGA TCCTCCAGCG GCCTCGTGA
 
Protein sequence
MRQVRACGVI LFRKTPHLTY LLLKHRHRFD LPKGHLEEGE NDLQCALREM EEETGIPRTD 
VVLDPTFSYS ETYHPVEARF GPEPVEKTLM IYLGWLNRDR PLKLTEHVGY EWRLWTPPHH
IQRYTINPLL AKIEEHFTSN PEVLRVDPPA AS