| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3146 |
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| Symbol | |
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| ID | 9139860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4068947 |
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| End bp | 4070002 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Helix-turn-helix type 11 domain protein |
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| Protein accession | YP_003631160 |
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| Protein GI | 296123382 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGACA CGACTCAAAT CCTGCGCCAA TGGATGTTGC TGCGGATTCT CTCTGCCCGT
CGGCAAGGCG TCACTCTCAA GGCGTTGGCC GAAGAACTCA AGGCGTCGAC CAAAACCATA
CAACGCGATC TCGCACTGCT CCAGCAACTG GCTTTCCCCA TTGACCAGGA GGTCTCTTCG
CACGGACGCA AACTCTGGAA AATGACTGAT ACCACCGGCA TACCAGCCCT CACATTCACT
CTCGAAGAAG CGGCCGCTCT TTACTGGGGA AGTCAGTTCC TCGAAGGGCT GGCTGGCACT
TACTTCTGGC AAGGCTCACG TACGGCTCTC AAGAAAATCC GCACAGCTTT AGGAGCACCG
GCACTCAAAC ACCTCCAGAA ACTGGCCACA GCCATTCATC TCACAAACGC CAGAGTCGTG
GATTATGAAT CGCGGGCCGA ACTGATCGAC AATTTAATGG TCGCGATCGA AGAACGCCGA
CTCACAGTAA TTACCTATCA ATCACTTCGG GCGACGGAAC CGGTCACACT TTTAGACATC
TACCCCTATG CCCTGGTTCA TCACAAGCAT GCTTTATATA TCATCGCCTG GTCACGGGAT
CACGAGGCTA TCCGCACCTT TAAGGTGGAT CGTATCAGCC ACGTCGAACT CCACGGCTGG
CAATTCAATC GCCCCGAGGA TTTCGACCCG GCAGCCCACC TAGAACATTC GTTCGGCATC
TTCTCGAGCG ATAAAGCACC AGAAACTGTG AAAGTCCGCT TTGCTCCTGG TGTCAGCCGC
ATTTTAGAGG AAAAACAATT CCACCCCAGC CAGAAACTCA GCACTCAGCG AGATGGGAGC
ATTCTGGCCG AATACCAACT CGGCCCCCTG GAAGAATTCA CCTCCTGGCT CCTCAGCTTC
GGCCCCCAGG TCGAAGTATT GGAGCCTGAA CACCTGAGAA CACGAGTCAT CGACTCCCTC
AGGCAGACAA TCCATCACTA CGAAAAACCA GGCTTACCGC CAACTTCGGC ACTAGCACCT
AAATTTTCAT TATCAGCCAA GCGGAAAGCG AAATAG
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| Protein sequence | MSDTTQILRQ WMLLRILSAR RQGVTLKALA EELKASTKTI QRDLALLQQL AFPIDQEVSS
HGRKLWKMTD TTGIPALTFT LEEAAALYWG SQFLEGLAGT YFWQGSRTAL KKIRTALGAP
ALKHLQKLAT AIHLTNARVV DYESRAELID NLMVAIEERR LTVITYQSLR ATEPVTLLDI
YPYALVHHKH ALYIIAWSRD HEAIRTFKVD RISHVELHGW QFNRPEDFDP AAHLEHSFGI
FSSDKAPETV KVRFAPGVSR ILEEKQFHPS QKLSTQRDGS ILAEYQLGPL EEFTSWLLSF
GPQVEVLEPE HLRTRVIDSL RQTIHHYEKP GLPPTSALAP KFSLSAKRKA K
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