Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3013 |
Symbol | |
ID | 9139725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3901268 |
End bp | 3902350 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003631034 |
Protein GI | 296123256 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.978748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGATG ATGAAACTCA GGCGGTCCCT CCTGATCAAG TCCAGCAGCC GACTCCACTG GACAATGAAG ACTTTGAAAA AGCGGCGTCT TCTCCCGCTG GTGCTGCTGA AGAGGCGTCA GATCAGATTG CCTGGGCCGA TCCCAACCAT GCGATCTCGC TGCATAACGT CACGCATCGT TATCAGGGAA AGAAGGCTCT GGATCGCGTC TCATTTGTCG TTGAAAAAGG AGCGCTGCAT GGGTTCGTCG GGCCCAATGG AGCGGGTAAG ACCACTTCGC TGAAACTGGT CTGCACGTTA TTGCAGCCAC AAGCCGGGCG CGTGCGCGTC TTTGGCGAAG ATGTCGTCGA TAACATTCGT AAAGTCCGCA CGATGATCGG CTTCATGCCC GATCACTTCA GTACCTACCG GCAGATGACT GTCAACGAAT ATCTCGATTT CTTTGCAGCG GCCTATGGGT TGCCACCAGC CCGCCGCATC GAAGTGATCG AGCAGGTGCT GTCGCTGGTG GATATGAACC ATCGCCAGAA CGATCTGATC AGCGGGCTTT CGCGAGGCAT GCAGCAACGC GTGGGGTTGG CGCGAGTGCT GGTCAATGAT CCGGAACTTT TACTGCTCGA TGAACCAGCT TCAGGGCTGG ATCCGCGAGC ACGTATTGAG TTGATGGATA TTTTGAGAGC CCTGCGGAGC ATGGGCAAAA CAATCTTCAT CAGCTCGCAT ATTCTTTCGG AACTGGCCGA ACTGTGTGAT GCCGTCACGA TCATCGACCG GGGAGAAATT CGCTTCTCAG GCCGCATTGG TGATCTGCTG ACCAATCCCC AGAATCGCCA CACGTTGCGA TTCGAGTTTG CTCCTGGTTC ACCCGAAATG CGAGAAGCTC TGGCTCAGAT CGAAGGGGTT GTTTCGGCGG AAAAATCGGG CGAAGGGGCC GGCTATCGCG TCGAGTTTGA TCCTGCCCGG CTCGATGCCA ATCAACTCGT CGTGCGCGTC GCTTCTCTGG GTGTCCCGCT GGTCAGCTTC AGTGAAGATC GGCGACAACT CAACGAAGCC TTCATGGATC TGACAACGGC TGGTGTTCGT TAA
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Protein sequence | MSDDETQAVP PDQVQQPTPL DNEDFEKAAS SPAGAAEEAS DQIAWADPNH AISLHNVTHR YQGKKALDRV SFVVEKGALH GFVGPNGAGK TTSLKLVCTL LQPQAGRVRV FGEDVVDNIR KVRTMIGFMP DHFSTYRQMT VNEYLDFFAA AYGLPPARRI EVIEQVLSLV DMNHRQNDLI SGLSRGMQQR VGLARVLVND PELLLLDEPA SGLDPRARIE LMDILRALRS MGKTIFISSH ILSELAELCD AVTIIDRGEI RFSGRIGDLL TNPQNRHTLR FEFAPGSPEM REALAQIEGV VSAEKSGEGA GYRVEFDPAR LDANQLVVRV ASLGVPLVSF SEDRRQLNEA FMDLTTAGVR
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