Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3011 |
Symbol | |
ID | 9139723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3896159 |
End bp | 3899032 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | DNA polymerase I |
Protein accession | YP_003631032 |
Protein GI | 296123254 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCTC CAGGCACAGA GAGCACTAAA GACACCGCTG TTCCCACAAT ACCCAGGGAA CGCGCCTGGC TGATCGATGT GTTCGGCGTC ATGTTCCAGG TGTTCCATGC CATCCCGCCG ATGACCAGCC CTGCTGGTCA GCCAACCAAT GCGGTCTTTG GCTTTTGCCG CGATCTCCTG TGGCTCATCG AAAAGCAGAA GCCCACCTGG CTCATCTGCG CCATGGATAG CCCGGGCCCC GGGATTCGCG AATCGTGGTA TCCAGAATAC AAGGCAAATC GTACCGAGAT GCCCGAAGAT CTCAGACCAC AAATCCCTCT CCTGAAAGAG GTTTTCGAAG CCTTTGGACT CCCCATCATT CAGCAGGATG GCTGGGAAGC TGACGACGTA CTCGCTTCGC TGGCTGCACA ATTTGCCAGG CATGGAACAG ATGTCGCCAT TGTCACGAAT GATAAAGATG CCCGCCAACT CCTGACGCCG CAAATTCAGA TCTATAACCT CAGGAAAATG ACCTGGTTCA ACGAAGCCTC CTTGCTCGAA GAGTGGGGCA TCAGGCCTGA TCAGGTAGTG GACTTTCAAG GACTGGTCGG GGATGCCGTC GATAACGTAC CCGGTGTGCC GCTGGTCGGG CCCAAAAAGG CAGCGGCTCT CTTGCAGCAG TTTGAGACTT TGGAAGGGGT TCTGGCCCAT GCCGATCAGG CCCCGGGTGC CAAGCTGAAA GAAAACCTGA AGAACTTTGC GGAACAAGCC CGGCTCAGCC AGAAACTCGT CCGGCTCAAC ACAGAACTTC AACTCGATTT TGACCCGGAA GCGGGCCGAC ACTTCCGTCC CGATGTAGAA AAGCTGCAGG CACTGTTCCG GCGCTTAGGC TTCCGTAAAC TGGTCGATGA AGCCGCCAGA GTCCTGGGAC AGGTTCCATC CTCCGCAGCG AGCACAACTC AAAATTCGGC GACCACTACA CCATCGTTGA ATGATGGGAA TCCTGCTGAG AATTCACTCT TCTCAGCGCC TGAAAACAAC ACTGTGGTAC CATCCAAGCC TTTACAAAGG CTGGAGCGAA CCTGGGAAAT GGTGAACACT CCGGAAGGAC TCGCAGCGCT CTCCCGGCAA TTGCCATTGC TCACGCAAAT CTGCATCGAT CTGGAAACAA CCGGGCTCGA CCCTTTGCGA GATGAAATCG TGGGCTGGGC CATTGCCTGG GCAGCCCAGC ATGGCCAGCC AGGCAGGGCG GTTTATCTGC CTGTCCTCGG GCCTCCAGGA AGCGTGCTGC TTGACGGAAC TGCAGTCGTT CAGACGCTCA AGCCCATTCT CGAAAATCCC CAATGCCAAC TGATCAATCA GAATGTGAAG TTTGACCTGC TGGCCATGCG CAAGGTGGGG ATTCGACCCG CCACCATCGG GCTGGACACC ATGGTGGGTG ACTACCTGCT CGATGCGGGA GCGCGTTCGC ATAACTTGGA AGTTCTGGGG CAAAAGTATC TCTCTGCCGC CACGATTCCG ATCTCGGATC TGCTGGGAAG TGGCAAAAAC CAGAAGACCA TGAATCAGAT CGAGATCGAG CGCGTCGCCG AGTATGCCAC CGAAGATGCT GAACTGGTCG TGCGCATGGC ACCCATCATT GAATCACAAC TCCAGGAGGC TGGACTTTGG AAGCTGTACG ATGAAGTTGA AAAGCCGCTG ATTCCGGTAC TGGCCGATAT GGAGTTCAAA GGGATCAAGG TCGATGTCCC TGAACTCGAA CGGCAGAGCC AGGAGCTATC GATCACGCTG GCCCGGTTGA TGTCCGAAAT TCATGAACTG GCGGGCCGGG AGTTCAATAT CGATTCCCCT ATGCAATTGC GAAAAATCCT CTTTGAAGAA CTAAAGCTGC CAGTTCAAAA GAAAACCAAG ACTGGCCCCA GTACCGATCA GGAAGTGCTC GAACTTCTGG CACCCTTGCA TCCTTTGCCT GCGAAAATTA CCGAGCACAG GCATCTGACC AAGCTCAAAG GGACATACCT CGATGCACTG CCACTCCTGG TTCATCCGCA GTCGGGGCGT ATTCATACCT CGTTCAATCA GGTGGTGGCT GCGACCGGCC GGTTAAGTTC CAGCGATCCG AATCTGCAGA ATATCCCTAT TCGGACTCCA GAAGGGAGCC GCATTCGCAG GGCCTTTGTT TCGTGCGACC CGGAGTGGCG ACTTGTCTGT GCCGATTACT CGCAGATCGA ACTACGCATG CTGGCCCATT TCAGCCAGGA TCCGGCACTG GTTTCCGCTT TTGAACACGG TGAGGACATC CATCGCCTCG TGGCGGCTCA AGTGCATCAG GTGGCCCTGG AAGATGTCAC CAGTGACATG CGCCGCATTG CGAAAGCGGT GAATTTCGGC GTGATGTACG GCCAGAGCCC TTATGGTCTC AGTGCCGCAC TCGGGATTAG CCGAGAAGCC GCCACGACTT TTATCGATGA GTATTTTACG AGGTATGCAG GTGTCACGAC CTTTATGGAA AACGTGCTCG ATGAATGCCT CGCAACTGGC TATGCACGGA CAATCCTTGG TCGCCGCCGG CCCATTGAGG GAGTACGCGG CCCCCGTGAA CGCAATCGAA ATCGAAACAT GGCCGAACGC ACGGGGATCA ACACGGTAAT TCAAGGGTCA GCTGCTGATC TGATCAAAAT GGCGATGATT CGAGTTCATC ATCGGCTCGA ACGCGAGAAT CATCCGGGGC AACTTCTGTT ACAGATTCAT GATGAACTCG TTCTCGAAGC TCCTGCTCAT CTGGCAGAAG AGTTGGGTGC CCTCGTCAGT GAAGAAATGA CAAAGGCCTT ACCTTTGGAT GTCCCACTGG AAGTGGATGT GGCCATTGGT ACCAACTGGC TCGACGCTCA ATAA
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Protein sequence | MNSPGTESTK DTAVPTIPRE RAWLIDVFGV MFQVFHAIPP MTSPAGQPTN AVFGFCRDLL WLIEKQKPTW LICAMDSPGP GIRESWYPEY KANRTEMPED LRPQIPLLKE VFEAFGLPII QQDGWEADDV LASLAAQFAR HGTDVAIVTN DKDARQLLTP QIQIYNLRKM TWFNEASLLE EWGIRPDQVV DFQGLVGDAV DNVPGVPLVG PKKAAALLQQ FETLEGVLAH ADQAPGAKLK ENLKNFAEQA RLSQKLVRLN TELQLDFDPE AGRHFRPDVE KLQALFRRLG FRKLVDEAAR VLGQVPSSAA STTQNSATTT PSLNDGNPAE NSLFSAPENN TVVPSKPLQR LERTWEMVNT PEGLAALSRQ LPLLTQICID LETTGLDPLR DEIVGWAIAW AAQHGQPGRA VYLPVLGPPG SVLLDGTAVV QTLKPILENP QCQLINQNVK FDLLAMRKVG IRPATIGLDT MVGDYLLDAG ARSHNLEVLG QKYLSAATIP ISDLLGSGKN QKTMNQIEIE RVAEYATEDA ELVVRMAPII ESQLQEAGLW KLYDEVEKPL IPVLADMEFK GIKVDVPELE RQSQELSITL ARLMSEIHEL AGREFNIDSP MQLRKILFEE LKLPVQKKTK TGPSTDQEVL ELLAPLHPLP AKITEHRHLT KLKGTYLDAL PLLVHPQSGR IHTSFNQVVA ATGRLSSSDP NLQNIPIRTP EGSRIRRAFV SCDPEWRLVC ADYSQIELRM LAHFSQDPAL VSAFEHGEDI HRLVAAQVHQ VALEDVTSDM RRIAKAVNFG VMYGQSPYGL SAALGISREA ATTFIDEYFT RYAGVTTFME NVLDECLATG YARTILGRRR PIEGVRGPRE RNRNRNMAER TGINTVIQGS AADLIKMAMI RVHHRLEREN HPGQLLLQIH DELVLEAPAH LAEELGALVS EEMTKALPLD VPLEVDVAIG TNWLDAQ
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