Gene Plim_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3005 
Symbol 
ID9139717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp3889036 
End bp3889713 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID 
Productmetal-dependent phosphohydrolase HD sub domain protein 
Protein accessionYP_003631026 
Protein GI296123248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.350219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCG AAACCCTTCC CGACCCACAG CATGTCATCG AACAGGTGGC ACACAAAGTT 
CGACAACTGC TCGAACATGA CGCGAGTGGT CATGACTGGT GGCATATCGA ACGGGTGCGC 
CACGTTGCCT TACAGTTGGC ACAAAAAGAA GGTGCCGATG CGTTTGTCGT CGAACTCGCT 
GCCCTGCTGC ACGACATCGG AGACTGGAAG AATCAGACCG ATGGACAGGA TCGGGGGGCA 
GAACTTTCGC GCGTATGGCT GGAAGAATTC GGACTCTCGC CAGAGACCGT TCAACATGTC 
GCCGACATCA TTGAAGGGAT CTCATTCAAA GGAGCCGGTG TCGCTACAGA AATGCCAACA 
CTGGAAGGAA AGTGCGTGCA GGACGCTGAT CGACTTGATG CGATTGGAGC GATTGGCATT 
GGTCGAGCTT TTGCCTTCGG CGGATCGCGC GGCCGACCCA TGCACGATCC CGAAGTCAAA 
CCAGAACTGC ACCAGTCGTT TGAAGACTAC AAACGGAAAA GCGGTGCCAC GCTCAATCAT 
TTCACCGAGA AGCTGCTGCT CCTCAAAGAG CGCATGCAGA CTCCCAGCGG ACGAGTTTGG 
GCCGAACAAC GGCATCAATT CACCGAAGAG TTTTACAATC GCTTCCTCGC CGAATGGGAT 
TCTCGCGACA TGGCCTGA
 
Protein sequence
MKSETLPDPQ HVIEQVAHKV RQLLEHDASG HDWWHIERVR HVALQLAQKE GADAFVVELA 
ALLHDIGDWK NQTDGQDRGA ELSRVWLEEF GLSPETVQHV ADIIEGISFK GAGVATEMPT 
LEGKCVQDAD RLDAIGAIGI GRAFAFGGSR GRPMHDPEVK PELHQSFEDY KRKSGATLNH 
FTEKLLLLKE RMQTPSGRVW AEQRHQFTEE FYNRFLAEWD SRDMA