Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2929 |
Symbol | |
ID | 9139641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3791806 |
End bp | 3792789 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003630950 |
Protein GI | 296123172 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.712071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCACC GACGCCAATG CCTGAAATCT CTGCTGACGG GAGGAGTGGC CTGCCTGCTG AATCTGAACT CACCACCCAC CCCGGAATTC GGCCACCTTT TCTCAAAGCC TGCCGCAGGG AACGAACTGG CCTTACCCGC AAAGCTGCAA ACCGGCTTCA GTCTGTATGG AGTTACCGAC CAGCCACTTA CCGCCGCTCT CCAGCAGATT GCCGAGACTG GTTACGGAGG GATTGAACTT CCTCTCCTTC CGGGCGGTTT GTTCGATCCT CTCAAGCTGT CGGCTGTCGA CTGCCAGGTG ATCCGTTCAC AGATCGAAGC CGAATCTCTC GACCTGCAGG CTGTCATGGA GAACCTGCCC CTCTTGAACC AGAACCTCTC AGCCGCAGAT GACGAGCAGC GTCTGAAGCG AGCTTTCTAT GTCTCACGCA AAGTTTCTCC TGAGACACAG CCATTGCTGG AAACGATTCT CGGCGGTAAA CCGGGAGATT GGCCGCAACT CAAAAACTTC GCGATCGATC AGTTGGGCCG CTGGGCAGAA CTCGCGAAGT CGGAAGACGC AGTGATCGCG ATCAAGCCTC ATATCTCGAA CGCACTTCAG AGGCCTGACG ATATTGCCGG AGTCTTCGAC GAAATTCGCA GCCCCTATTT ACGGCTGGCC TTTGACTATA GTCACCTCGA ACGACAGCGC ATCCCCATCG ATGTCGCCGT CCGAACCTTG GCCCGTTATT CGGTCTTTGT GCATGTGAAA GATAACGTCC CGGCAGGAAC CGGCTGGCAA TTCGCCCTCC CCGGCCAGGG AACAACCGAT TACGCGACGT TATTCACTTC ACTCAAAGAA GCCGGCTATC GCGGACCAAT CTGCGTCGAA GTCTCCAGCC AGGTCTTCTC GAAACCCGGC TTCAGCAGCA AAGAAGCCAT CACCAACACC TGGACCGCCT TAAGACCCGC CTTCGAAAAG GCGGGCATCA TTACCGTAGC GTGA
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Protein sequence | MLHRRQCLKS LLTGGVACLL NLNSPPTPEF GHLFSKPAAG NELALPAKLQ TGFSLYGVTD QPLTAALQQI AETGYGGIEL PLLPGGLFDP LKLSAVDCQV IRSQIEAESL DLQAVMENLP LLNQNLSAAD DEQRLKRAFY VSRKVSPETQ PLLETILGGK PGDWPQLKNF AIDQLGRWAE LAKSEDAVIA IKPHISNALQ RPDDIAGVFD EIRSPYLRLA FDYSHLERQR IPIDVAVRTL ARYSVFVHVK DNVPAGTGWQ FALPGQGTTD YATLFTSLKE AGYRGPICVE VSSQVFSKPG FSSKEAITNT WTALRPAFEK AGIITVA
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