| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2922 |
|---|
| Symbol | |
|---|
| ID | 9139634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 3783683 |
|---|
| End bp | 3784807 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF450 |
|---|
| Protein accession | YP_003630943 |
|---|
| Protein GI | 296123165 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCA TAGATCAGTT GCGAATTCTT TCCAGTCGCA TCAGCCAGAC AAAAACATTG
GTTCAGACTG AAGAGGCAAC AAAGAACGCA ATGATCATGC CCTTCATTCA GATTTTGGGC
TACAACGTCT TCGATCCACT TGAAGTGACA CCCGAACTTG TCGCAGAAGT TGGTACGAAG
AAAGGTGAAA AGGTCGATTA TGCGATCTTA AGAGATGGGA AACCCATCAT TCTATTTGAA
TGCAAGAAAT GCGGAGGCGA TCTGCATATC AACCACGCCA GCCAGTTGTT TCGCTACTTT
CATGTGACTG AAGCACGTTT TGGCGTACTG ACGAATGGTT TGGTTTATCG ATTCTTCACT
GATCTTGAAC AACCAAACAA GATGGATGAA AAGCCTTTCT TTGAGTTTAA CATTCTTGAT
TTCAAAGACC GAGATGTTGA GGAACTCAAG AAGTTTACCA AAAGTGCTTT TGATATCGAC
ACGATTCTGA CTACAGCCAA CGATCTCAAA TACACACGAT CAATTCAAAC GCTGTTGTCA
GAATGGATGA CCAACCCTTC GGAAGATTTT GTGAGACTGC TTTCCGCTGA TCTCATCGGA
AATCGAAGAT TTACCCCAGC AGTTAAAGAT CAGTTTACAT TGATCACCAA AAGGGCATTT
GATCAACTTC TCGGAGAAAA GATCAATGAA CGCCTTAAAG GGGCCATGGC ACCGGAAGGC
GTAACAATCG CAGAATCCCC ACGATCAGCA GCCACCAACG ACATTGCTAC AACCGAAACC
GAACCAGCAA TTGTAACCAC TTCCGAAGAA ATTGAAGGCC TTCATATCGT CAGATCAATC
GTGCGAGACC TGATCTCACC TCGTCGTGTC GTCATGCGAG ACGCCCAAAG TTATTGCGCA
ATTCTACTCG ATGACAACAA TCGGAAACCT ATCTGCAGAC TCAGATTCAA CAACACTCAG
AAATTGCGTA TCGGCCTCTT CAAAGACAAT AAAGAAGAAG AGCTTATGAA TCTTGAATCC
GTTGATGATA TCTACTCATT TGCTGATCGA ATTAAGGCCA CTCTGAGCTC ATACATAAAA
TCTGATGGTA GCCTAGATAG CTCGCAAATA TCTACCGCAC CGTAG
|
|---|
| Protein sequence | MDLIDQLRIL SSRISQTKTL VQTEEATKNA MIMPFIQILG YNVFDPLEVT PELVAEVGTK
KGEKVDYAIL RDGKPIILFE CKKCGGDLHI NHASQLFRYF HVTEARFGVL TNGLVYRFFT
DLEQPNKMDE KPFFEFNILD FKDRDVEELK KFTKSAFDID TILTTANDLK YTRSIQTLLS
EWMTNPSEDF VRLLSADLIG NRRFTPAVKD QFTLITKRAF DQLLGEKINE RLKGAMAPEG
VTIAESPRSA ATNDIATTET EPAIVTTSEE IEGLHIVRSI VRDLISPRRV VMRDAQSYCA
ILLDDNNRKP ICRLRFNNTQ KLRIGLFKDN KEEELMNLES VDDIYSFADR IKATLSSYIK
SDGSLDSSQI STAP
|
|---|
| |