Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2803 |
Symbol | |
ID | 9139515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3637038 |
End bp | 3641549 |
Gene Length | 4512 bp |
Protein Length | 1503 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | membrane-bound dehydrogenase domain protein |
Protein accession | YP_003630824 |
Protein GI | 296123046 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.772746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACAAC TCATGAATTT CTCTCAGCGA ATGCTGGCCT CTTTACTGCT GGCCAGTCTG GTTTTGATGA ACTGGCCAAC GCAGACACTT GGGGCCGAGA ATGTGCCCCT GAATGTCCTC TTCCTGGGGG ACAAAGGCCA TCATCAGCCC CAGGCACGCT TCAATGATCT GCAGCCTGCA CTGGCCAAGC GTGGCATCAA TCTGACTTAC ACAGAAGACC CTGGTGTTCT GAGTGCTGCC GGGCTAGCTC CGTACAAAGC CCTGGTCGTT TACGCCAATA TCGACAAGAT CACGCCCGAG CAGGAAACGG CTCTCATCGA GTACGTACAG AATGGTGGTG GGTTTGTGCC ACTCCACTGT GCTTCGTTCT GCTTCCGCAA CTCCCCCAAA TATGTGGCTC TGGTTGGTGC CCAATTTTCC AAGCATGGAA CAGGCGTCGT CGAGACTCGG CTCGAAGCCA TCGATCATCC CATTCTTAAA GGTTTTTCCG GCTTCAAGAG CTGGGACGAA ACATATCGTC ACTCGATGCA CAACCCCATG GGCCGCACAG TCCTCGAGTA TCATCCTTTG AGTGCCGACG AGCTCAAGAA AGATCCCAAG GCATTGGCGG AAGAGCCCTG GACATGGGTT CGCAATGAGG GCAAAGGCCG CGTCTTTTAC ACCGCCTGGG GTCACGACGG GCGAACGTTC TCCAACCCTG GTTTTCAGAA TCTGGTCGAA CGTGGCATTC GCTGGGCAGC CAAAGATGAA AGCACAGTCC CGGAATACAA AGAAAAAGCC AGCTTCCAGC CCCCAGCTAT GACAGCCATC AAGCCCTCAG CGGCTTCATT TGAGTACATC GATGTCGGAA GCAAAATTCC CAACTACGTC GCTGGTGCTC AATGGGGTAA GCAGGAAAAG CCACTGTCAC TCATGCAGTT GCCTTTACCG CCTGAGAAGT CACTCGAGCA TTATGTGAGT CCGGAAGGGA GCCAGCTCAA ACTCTTTGCT GCCGATCCAG AGCTGGGTGG CAAACCGATT GCATTCAACT GGGATGAAGC GGGGCGGCTG TGGGTTTGTG AAACCATGGA TTACCCCAAT GAGCTGCAGC CTAAAGGCAA AGGCCGCGAC CGCATTCGTA TTGTCTCCGA TACGAATAAC GATGGCGTGG CCGACCGTTT TGACATCTTC GCCGAAGGAC TAAGTATCCC GACTGCGATT GTTTGTGTCC GCGGTGGTGC CATTGTGCAG GACGGCCCGG AGACGATCTT CCTCAAGGAC ACCAATGGCG ATGGGAAAGC TGATGTCCGC AAACTGCTGA TCAGTGGCTG GGCCATTGGC GATACCCACG GCGGTGTCAG CAACTTCCTG TATGGGCTCG ATAACTGGAT CTGGGCCATG CAAGGCTATA ACGATTCACA GCCAATCCTG ACCAATGGTC AGGCGGCTGG TCGATTCAAG CAGGGCTTCT TCCGCTTCAA GGTTTCTGTC AGTGCTGATG GCCTCCCCGA AGTCAACGAA CTGGAGTTCA TCCGTTCGAC CAACAACAAC ACATGGGGGT TAGGTATCAG CGAAGATGGG CTGATTTTTG GCTCGACAGC CAACCACAAT CCTTCGGTCT ATATGCCGAT CCCTAATCGA TATTATGAGC AGGTTCGTGG CTGGGCCGCT CGCGGATTAG GAACAATTGC CGATACCCAT CTTTTCAAGC CGATTACAAC CAAAATACGA CAGGTCGATC ATCACGGTGG CTACACCGCC GGTTGCGGCC ACGCACTCTA TACCGCCCGC AACTATCCCG AATCCTGGTG GAATCGCACA GCGTTTGTGT GCGGCCCCAC AGGTCACCTC GTGGGCACCT TTGTACTGAC TCAGAACGGG ACAGATTTCT CATCCACCAG CCCGAATAAC CTCGTGGCCA GTGATGATGA GTGGGCCGCC CCCATCATGG CGGAAGTCGG GCCAGATGGG AACATGTGGA TCCTCGACTG GTATAACTAC ATCGTGCAGC ATAATCCGAC GCCCGCTGGC TTCAAAACCG GTAAAGGGAA TGCGTACGAA ACTGATCTGC GGGATAAGAA GCATGGCCGC ATCTTCCGTC TGATCTGGAA TAACCGTCCG GGTGCTGTGA CTGCCGATCA ATCGACCACA CGCAGCCTCG CAGGTGCTGA TCCACAGACT CTCGTCAAAG CCCTCGAAGA CAATAACTTC TTCTGGCGAA AGCAAGCCCA GCGTCTGCTG GTGGAGCAGC AGGATCAATC CGTCGCACCC GCACTGCTGG CCCGGTTGGG AGAACACCAC GTCGATGCCA TTGGGCTCGA CCCCGGCGCC ATCCATAGTG CGTGGACACT CAAGGGGCTG GGTCAACTTG AAAGTCTCAG TGATCCCGCG ACAGTCAAGG CTGTCACAGC GGGCCTGACT CATCCCTCGG CAGCCGTCCG CAGAAATGTG ATTCAAACGT TGCCACCTGT CCCCATGACA CCTTCATTGA TTGCCAAGAC GCATGTGGCA ACCGATGAAG AACCTCTCGT CAGGCTGGCG GCTTTTCTGG CACTGTCCGA TGCACCAGCC ACCAGCGAAT CGGCAACCAT CATCGCCGGT GCGTTGCGTG ATCCTGCGGT CTTTGCTGAT CGATATTTAC CTGAAGCCTT AACAGCAGCG GCTGCTCGTA ACGATGTCCT GGTCATTGAG GCTCTGGCTG AAAAGACCGC TCAGACCACT CCTTCTCAAA CCCCACTTGC CGGACCTGCT CTGGAGTTAT TGAAGCGTGT AGCGGAACAT TCGGCCCGCA GCGACAAATC CGAGTCTGGT TCTGCGATGC TCGCTCAGAT TTCAAAAATG CCTCAAGATG CCGCCGAAGC GATCATTGCC GGTCTGTCGA CAGGCTGGCC TCGCAAGTCA ACAGAGGCAG CCAATGCAAC ACCCGAGCAG GTTGAGGCCA TTACAAAATT GTATCGCGAG GTATCACCAG CCAGCCGCTC GCAGCTTCTC GCCTTGAGTC AGCGGATGGG GCTGAATGTG CTCGAAAAGT ATTCCGGCGA ACTGGCTGCA CAGTTTCTCG CTAAGGTGAA AGACGCCAAA CTGCCCGAAG CAGAACGACT GGCGGCCGCC CGCGATTCAA TTGCACTCCT TCCCACCAAT GCCGAGATTG CTGGCCAGCT CCTGGATCAG CTTTCGGTCA AGTCAACTCC GCAGTTGACC AATGGGATTC TGTCTGCACT CACGGCTTCC GAATCGCCCA TGACAGGTGT GGCCCTGATC AATCATCTGG GAAGCATTAC TCCCGGTTCA CGTCCGCAGG CTTTGCGCAT GCTGCTCGCT CGCAACGACT GGACACTTTC GCTCCTTGAA GCCAGTCAGG CCGGCAAACT GAGTCTGGGT GAATTGCCAC TCGATCAGCA GCAGTCTCTG GCAGCTCATC CCGATGCTAA AATTCAGAAA CTAGCTCGCG AAATTCTCGC CAAGGGCGGT GGCCTGGCCA GTGCTGACCG GCAGGCGGTG ATTGATCAAC TCGATCATGT GACGAAAGAG ACGGGCGATC CTGTCGCAGG GAAGCTGATC TATACTCAGC AGTGTGCCAA GTGCCACGTC TATGGTGATC TGGGTCAAAA AGTCGGGCCG AATCTGACAG GGATGTCGGT GCATCCGAAG CATGAGTTAC TGGTGCATAT TCTTGACCCG AGCCGCAGTG TCGAAGGGAA CTATCGGGCC TATTCCGTGG TGCTGGAAGA TGGTCGTGTC TTTACAGGCC TGCTCGCTTC GGAAACAAGA ACCACCATTG AATTGCTCGA TGCCGAAGGT AAGCCTCAAT CGATTCAGCG GGACGAGATC GAAGAACTCG TTGCTTCGAC GAAATCGTTG ATGCCGGAAG GCTTCGAGAA GCAGATCACT CCCGCCGGGA TGCGCGATCT GCTGGAGTTC CTCAAGCAGC CCGGGAAGTA TCTCCCCCTG CCACTGGAGA AGTTTGCCAC CATCAATACG ACTCGGGGAA TGTTCTACAG TGCGGATGCT CAGGCAGAAC GGCTGATCCT GGAGAACTAT GCCCCCCGCA ATGTGGGCGA TGTTCCCTTT GCATTCGTTG ACCCGAAGGG TGCAGCCACA CCCAATGCCA TCATGCTCTA CAGTGCGAAT GGCAAGTTCC CTCCCGAAAT GCCGAAGCAA GTCACATTGC CTTGTGGCCT TAAGGTGAAG ACGATTCACC TGTTGGGTGG CGTGGGTGGC TGGGCCTTCC CTGCTTCGGA AAAAGGGACC ACCTCGATGA TTGTCCGGCT GAAGTACAGC GATGGTTCGA CTGAAGATCA CAAGCTGATC AATGGAGAAC ACATTGCTGA CTACATCCGC CGGGTGGATG TCCCTCAATC GACCTTTGCC TTCTCGGCTC GTGGGCAGCA GTTGCGCACC GTCTCGATTA ACTGCGGCAA AGACCTCCCT CTGGAGACAA TTGAACTCAT CAAAGGAAAC GACGGGACAG CCCCTGTGGT CATGGCCGTC ACACTGGAGA TGGGACAGCA ACCTGCCGCC AAAAAGGAAT AA
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Protein sequence | MRQLMNFSQR MLASLLLASL VLMNWPTQTL GAENVPLNVL FLGDKGHHQP QARFNDLQPA LAKRGINLTY TEDPGVLSAA GLAPYKALVV YANIDKITPE QETALIEYVQ NGGGFVPLHC ASFCFRNSPK YVALVGAQFS KHGTGVVETR LEAIDHPILK GFSGFKSWDE TYRHSMHNPM GRTVLEYHPL SADELKKDPK ALAEEPWTWV RNEGKGRVFY TAWGHDGRTF SNPGFQNLVE RGIRWAAKDE STVPEYKEKA SFQPPAMTAI KPSAASFEYI DVGSKIPNYV AGAQWGKQEK PLSLMQLPLP PEKSLEHYVS PEGSQLKLFA ADPELGGKPI AFNWDEAGRL WVCETMDYPN ELQPKGKGRD RIRIVSDTNN DGVADRFDIF AEGLSIPTAI VCVRGGAIVQ DGPETIFLKD TNGDGKADVR KLLISGWAIG DTHGGVSNFL YGLDNWIWAM QGYNDSQPIL TNGQAAGRFK QGFFRFKVSV SADGLPEVNE LEFIRSTNNN TWGLGISEDG LIFGSTANHN PSVYMPIPNR YYEQVRGWAA RGLGTIADTH LFKPITTKIR QVDHHGGYTA GCGHALYTAR NYPESWWNRT AFVCGPTGHL VGTFVLTQNG TDFSSTSPNN LVASDDEWAA PIMAEVGPDG NMWILDWYNY IVQHNPTPAG FKTGKGNAYE TDLRDKKHGR IFRLIWNNRP GAVTADQSTT RSLAGADPQT LVKALEDNNF FWRKQAQRLL VEQQDQSVAP ALLARLGEHH VDAIGLDPGA IHSAWTLKGL GQLESLSDPA TVKAVTAGLT HPSAAVRRNV IQTLPPVPMT PSLIAKTHVA TDEEPLVRLA AFLALSDAPA TSESATIIAG ALRDPAVFAD RYLPEALTAA AARNDVLVIE ALAEKTAQTT PSQTPLAGPA LELLKRVAEH SARSDKSESG SAMLAQISKM PQDAAEAIIA GLSTGWPRKS TEAANATPEQ VEAITKLYRE VSPASRSQLL ALSQRMGLNV LEKYSGELAA QFLAKVKDAK LPEAERLAAA RDSIALLPTN AEIAGQLLDQ LSVKSTPQLT NGILSALTAS ESPMTGVALI NHLGSITPGS RPQALRMLLA RNDWTLSLLE ASQAGKLSLG ELPLDQQQSL AAHPDAKIQK LAREILAKGG GLASADRQAV IDQLDHVTKE TGDPVAGKLI YTQQCAKCHV YGDLGQKVGP NLTGMSVHPK HELLVHILDP SRSVEGNYRA YSVVLEDGRV FTGLLASETR TTIELLDAEG KPQSIQRDEI EELVASTKSL MPEGFEKQIT PAGMRDLLEF LKQPGKYLPL PLEKFATINT TRGMFYSADA QAERLILENY APRNVGDVPF AFVDPKGAAT PNAIMLYSAN GKFPPEMPKQ VTLPCGLKVK TIHLLGGVGG WAFPASEKGT TSMIVRLKYS DGSTEDHKLI NGEHIADYIR RVDVPQSTFA FSARGQQLRT VSINCGKDLP LETIELIKGN DGTAPVVMAV TLEMGQQPAA KKE
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