Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2678 |
Symbol | |
ID | 9139390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3469810 |
End bp | 3470859 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF1559 |
Protein accession | YP_003630700 |
Protein GI | 296122922 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.28415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCGTT TTCGAGGGTT TACGTTGATT GAGTTGCTGG TGGTCATCGC AATTATTGCG GTGCTCATTG CCTTACTTCT TCCTGCGGTT CAGCAGGCAA GAGAGGCGGC TCGACGGACA CAGTGCCGTA ACAATCTCAA GCAACTTGGT CTGGCCATGC ACAACTATCA TGACCAGTCG AACATGTTTC CGATGTCAAC GACACGCGTC ACTAGCTCGG GTCAATCGAC AACAACCGCA GCCAGTTGGA TTGTCCGACT GTTCCCCATG ATGGATCAGA CAGCGGCCTA CAATTCACTG GCCTTTACTG ACAACGATTT CACGATGGAA CGTGGTAAGA ACCGCGCCTG GCAGACCATG AGCAGTTTGC GAGTTGCGGG TCTCAATTGC CCATCAAGTC CCTTGCCTCA AACAAGAACT CAAAACACCA ATACAGCCAC GCGCGGCTTA ACAACGGGTG TCCCGAACTC TATTGCAATT CAGACAACGA ATTATGTGGG CATTGCCGGT GCCTACGATG CACCAGCTGG TGGGACGGCA AATGACACGA TCTGGGAAGG GGCTCATGGT CGTCAAGTTT GGAACGGGCT GATCAACCCT CCCATTAAGG GTTTCTCGAC AGTTGGCTTG CAGAAGGTGA CAGATGGTTC CACAAATACT GTGATGGTGG GTGAGCAAGG CAACTTCCGA AAGGATTGCA GCGGCAATCC GGTTGATCGT CGGACCAGTA ACTCGAATGG TGGTCTGTGG GCTGGAGGGC CTGGTGGAGA AGATCCGGCT GATCAATACT ATGGTTTCTG GGGTAATGTC ACAAGTTTCC GGGCTCCGGC TGGCATCAAC TATGACGCTG ACTGCAGCAA TCCATTCGGT ACTGTGCCCT ACTGGTATGG CGATCCCGGT TACCACCACG TCTTTAATTC GGCTCACACG GGTGGTGCTC ACTTCCTGTT CGCAGATGGT TCTGTCCGTT TTCTATCACA GAACATGTCA CAGTCCATTT TGAATGCCCT GTGCAACAAG AACGACAACA CTCCAGTTGG CGAATTCTAA
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Protein sequence | MPRFRGFTLI ELLVVIAIIA VLIALLLPAV QQAREAARRT QCRNNLKQLG LAMHNYHDQS NMFPMSTTRV TSSGQSTTTA ASWIVRLFPM MDQTAAYNSL AFTDNDFTME RGKNRAWQTM SSLRVAGLNC PSSPLPQTRT QNTNTATRGL TTGVPNSIAI QTTNYVGIAG AYDAPAGGTA NDTIWEGAHG RQVWNGLINP PIKGFSTVGL QKVTDGSTNT VMVGEQGNFR KDCSGNPVDR RTSNSNGGLW AGGPGGEDPA DQYYGFWGNV TSFRAPAGIN YDADCSNPFG TVPYWYGDPG YHHVFNSAHT GGAHFLFADG SVRFLSQNMS QSILNALCNK NDNTPVGEF
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