Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2471 |
Symbol | |
ID | 9139182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3223362 |
End bp | 3224378 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF1559 |
Protein accession | YP_003630496 |
Protein GI | 296122718 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTTTCT CTCGTTCCGG TTTTCCCGGT GTTTCGCAAG CTCGAAGAGG TTTTACGCTG ATTGAATTGC TGGTGGTGAT TGCCATCATC GCAGTGCTGA TTGCACTGTT ACTACCAGCT GTTCAGCAGG CCCGTGAGTC TGCCCGAAGA ACACAATGCA GGAATAACCT CAAGCAGCTC GCGCTTGCGG TTCATAACTT CGAGAGTACC TACGGGCGTC TTCCAAGTGG TCCCTTGAAC GATGCGGGAA CCCCTGCACT GGCTCACCCA CCTTCCACTG CCTCAAGGGT CAGCACACTC GTCCATTTAC TGCCTTATAT GGATCAGGCT CCGTTGTTTA ATACGATTGA TCCTAATCAA CTCAATCCGG ACATCCTGCC ACCCAATCAG ACTAACTGGT TTTGGGATGC GGGATGCAAT CGCGCGGCAG CCACTTTGAT TCCGGGATTT ATCTGCCCGT CGGATTCGAT GGCAAATCAG GATCCTACCG CCCAAGTGGT GATCGGTCTT TCCTGGATTC AGACATCAGG TGGCGGGTCA CGCAGTCTTT CGTTCTTCTC TCCCACGACT GTTCCAACCA CCGCAACAGG GTTACCAGCG AGCAGTTTCA AGCGTAGTAA TTATGCGATG TTTGCTGGGG TCTACGGTGA TGTCTCCGGT TGGGGGTTGT ATAAAGGAAT TGCGTGCAAC CGCAGCAAAA AGCGGATGAG AGATATTTCC GACGGTACGT CGAACGTGAT GATGTTCGGT GAGCAGATTG GGGGCATCAC TACGCAAGGT TCGCTCGCAA GTAGCATGAG CTGGATGGGT GCCAGCGCGA AACTCACTTT TCCAGGTATG TTCCTTGCCA ACCCAGCCAC AGCTGATGCA TGGCGTTTCT CCAGCCCTCA TGATGGGATG ATGCACGTCG CGATGTGTGA TGGTTCAGTT CGTGTGCTCA ATGCGAACAT GAACACAACG GTCTTCCAGT ACTACCTGGC TGGTGCCTCA GATGGAAATA ACGTTGGGGA ATTCTAA
|
Protein sequence | MVFSRSGFPG VSQARRGFTL IELLVVIAII AVLIALLLPA VQQARESARR TQCRNNLKQL ALAVHNFEST YGRLPSGPLN DAGTPALAHP PSTASRVSTL VHLLPYMDQA PLFNTIDPNQ LNPDILPPNQ TNWFWDAGCN RAAATLIPGF ICPSDSMANQ DPTAQVVIGL SWIQTSGGGS RSLSFFSPTT VPTTATGLPA SSFKRSNYAM FAGVYGDVSG WGLYKGIACN RSKKRMRDIS DGTSNVMMFG EQIGGITTQG SLASSMSWMG ASAKLTFPGM FLANPATADA WRFSSPHDGM MHVAMCDGSV RVLNANMNTT VFQYYLAGAS DGNNVGEF
|
| |