| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2465 |
|---|
| Symbol | |
|---|
| ID | 9139176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3214274 |
|---|
| End bp | 3215527 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003630490 |
|---|
| Protein GI | 296122712 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.18795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTG CGAAGACTCC AGCAATCCCG AGCCTCTCTG AAACCCAGCA CAACATCTAT
GACCGGGTCT TCTGGCTGGC GTACCTGGCA AACATTCTGG CTGTTATGGC CAATGCACTT
ACGTTTCGAT TTGCCGAACT GGTTCACTAT CTCGGCGGGA ACGAGCAGAC CACGGGCAAT
ATCGTCAGTG TGGGTTTGAT TGTCGCTGTG CTCGCGCGGC TCGTGCTCTC CAGCAGCATT
GATTATTACG GCACCCGGCT CGTCTGGACG CTCTGTTCGG CTTTATTCAC GGGAGGGAGC
CTTGTCTTTC TCTTAGCCAC AGGGCTGGGC TGGCCACTTT ATGTCGCCAG AGCCGCGTTT
TATACCGGGT TGACGGGGAT GTTCGCCTGC TCGATGACAC ACATCCAGAA CCATGTGCCA
CTCAGCCGCA GAACTGAGGT GATCGGCAAT CTGGGAAGTA GCGGGTTTGT GGGGATGATC
ATCGGCTCGA ACATTGCTGA TCAGGTGGTG CGCTGGATCC CTGATCTCCA TGAACAGTTT
TATGCCCTCT TTGGCGGGGC GGCGGCGATC GGTCTGGTCT ATTTATTGCT CATCCGGCAA
TTCCCACAGA CGGGGCATCA TGAGCCGATG ACGGAGCCGC AGTCGGCGGT CCGATTGCTT
TATCGATACT GGCCGGGAGC GGTGGTGCTG GCTGCCATGA TGATGGGACT GGGGCAGACG
GTGACGACGG TTTTTCTGAC TCGCTTTGCG ACAGAGCGCG GGCTGAACGG GATTGCGATT
TTCTTTTCGG CCTATGCCAT CAGTGCGTTC TGCTTCCGGA TCAGTGTGCG GAACTGGGGT
TGGACAATTG GTCGGCGGTG GATGCTCTTT CGTGGCTTGA TGGGCCAGAC AGCAGGCCAT
CTCATGATCC CATTCGTGAC AGAGGACTGG CAGCTCCTGA TACCCGCGAT CATCTGTGGC
TTTGGGCATG CAATTTTATT TCCGGCTGTC GTATCGCTGG GAGCAGGTGC TTTTCCCGTG
TCGGCCCGAG GGACAGGGAC GGCCATCATC CTGGGGATGA CCGATCTTGG CGGTCTCGTC
TTCGCCCCGT TTCTGGGCTG GATCATCGAC GAAGCCGGCT TCTTCTGGAT GTTCGCGACC
AGCGCGGCCA GCGCCTTTCT GGTGGGTTGT TTATACCTTG TCGTCGCCAG TCGGCATCCC
GATGAAGAGT CGCGGCATGG GCGGGTAGCG AGTGGTGTCG GCACAGCACC CTGA
|
|---|
| Protein sequence | MNPAKTPAIP SLSETQHNIY DRVFWLAYLA NILAVMANAL TFRFAELVHY LGGNEQTTGN
IVSVGLIVAV LARLVLSSSI DYYGTRLVWT LCSALFTGGS LVFLLATGLG WPLYVARAAF
YTGLTGMFAC SMTHIQNHVP LSRRTEVIGN LGSSGFVGMI IGSNIADQVV RWIPDLHEQF
YALFGGAAAI GLVYLLLIRQ FPQTGHHEPM TEPQSAVRLL YRYWPGAVVL AAMMMGLGQT
VTTVFLTRFA TERGLNGIAI FFSAYAISAF CFRISVRNWG WTIGRRWMLF RGLMGQTAGH
LMIPFVTEDW QLLIPAIICG FGHAILFPAV VSLGAGAFPV SARGTGTAII LGMTDLGGLV
FAPFLGWIID EAGFFWMFAT SAASAFLVGC LYLVVASRHP DEESRHGRVA SGVGTAP
|
|---|
| |