| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2413 |
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| Symbol | |
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| ID | 9139124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3144711 |
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| End bp | 3146921 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_003630438 |
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| Protein GI | 296122660 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.746859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCTC CCGCACCATT AACGGATCGA ATCGCTCAAG CTCTGCAACT TCGACCTGCC
CAGGTCGAAG CAGCCGTTCG TTTGCTCGAT GAAGGGAACA CGATCCCGTT CATCACCAGG
TATCGCAAAG AAGCCACCGG CAATCTCGAT GAAGAGAAAC TGCGGCTTAT CAGCGAAGAG
CTCACGTCCG GGCGTCAACT GGAAGAACGG GCATCGGCCA TTACCCGCTT GCTTCAGCAG
CAACAGCAGC TCACGCCAGA ACTGGAAGCC TCCATTCGCG GGGCGACATC ACTCAAACAA
CTCGAAGACC TCTACCTTCC ATTTCGCCCC AAGCGAAAAA CCCGGGCCAC AATTGCCAGG
CAACGTGGGC TGGAACCGCT GGCCACACGC ATTCTGCATG ATGATCGGAC ATTGGGAGAT
TTGCAGCAGG CCGCGAAGAG TTTCATCTCC ACCGAACAGG GGTTGAACAG CGTCGAAGAA
GTTTTGAGTG GTGCTCAGGA TATCATCGTC GAGTGGATCA GTGAGAACTC AGCAGTTCGC
GAGGCGTGCC GACAGGTTCT CCGTCAGACA GGTCGACTGC AATCCACGGG GATCGAAAAA
GCGACACCCC AGATGCAGGC CGAGTACCGC GACTACCTCG ACTTCTCCGA CATGATCATG
AAAATCCCTC CTCATCGGCT GCTCGCACTC AATCGAGGTG AGCGCGAAGA GGTTTTGCGC
ATCAAGGTTT CGTGGGATAA ACATCGCGCA CAGTTTGTCA CTGGCAAAAT TCTGAATGTC
GATGCCCGCT GCTACAACCA GTTCATGAAC GAGGCGATTG CAGAAGCACT CGAACGGCAT
CTGCTCCCTT CGCTCGACCG GGAACTACGC AAAGACGTCA CACTCAAAGC CGAGAAACAC
GCGATTGATG TCTTCGCCAG AAATCTTCGC AACCTTTTGC TCCAACCTCC GTTATCACCC
CAGCGGGTGC TGGCCATCGA TCCTGGTTTA CGAACGGGTT GCAAGCTGGC TGTGCTGAAC
GAAACCGGCG ATGTCCTCGC ACTCGATGTG GTCTACATCA CCGGCAATGC CGACCGGCAA
CTCGAGGCAC GCAACAAGAT TGTCCAGCTG GTTCGCGAGC ATGGCATCAA AACCATCGCG
ATTGGCAACG GAACGGCCTG CCGCGAAACG GAAGAACTCG TGGCACAGGC TATTCGCGAT
GAACTGCCCG ATGTGCATTA CATTATCGTC AATGAGGCCG GGGCGAGCAT TTACTCCGCC
AGCACCATTG CCCGCGAAGA ATTCCCCGAG CTGGATGCCA CCGCTCGAGG GACAATTTCC
ATTGCCCGCC GCTTGCTGGA TCCCCTCAGT GAACTCGTCA AGATCGAACC TCAACACTTA
GGTGTCGGCA TGTATCAGCA CGACATTCCG CCCAAACAAT TGAAGTCGGC TCTCGATGGT
GTGGTTGAAT CGTGTGTGAA CTATGTAGGT GTCGATCTCA ATACGGCGAG TGCCTCGTTA
CTGCGGTATG TCTCGGGGCT GAATCAACTC CTCGCCAAGC GAATTGTCGA TCGACGCAAA
GTTCGTGGGC CATTTCGAAA TCGGGCCGAA CTGCTCGAAG TCCAGGGGAT CGGCCCCACG
ATCTTCACTC AGGCAGCGGG CTTTTTGAAA GTCGCCGGGA GTGAACCACT GGACGGCACG
TGGATTCACC CGGAGAGCTA CCCAGCCACC AAAACCCTGC TGGAAAAGCT GCAGGTTCCA
CTCGTCGAAT TAACCGGCGA AAACTCCACC AATCTATGGC GGAGCCAGTT GCTGCAGCAG
GCCGAACAGA TCAAACAGCA ACCCACCGAA CTGGAACGTC TGGCCAGCGA TGTGCATGTC
GGCATGGAAA CTTTGCGCGA TATCCTCGAC TCGCTGCTAA GGCCCGGGCG CGATCCGCGC
CTCGACCTGC CCAAGCCGGT CTTCAGGCAG GACATTCTGC GATTTGAAGA CCTCGCGGAA
GGTGTCGAAC TGGAAGGGAC CATCCTCAAT GTGGTCGACT TTGGTGCATT TGTTGACATT
GGCTTAAAGG ACAGCGCTCT GATCCACGTT TCCAAAATGT CGAATCAGTT CATTCGCAAC
CCGCACGAAA TTGTCTCGGT GGGAGACCGC GTCACCGTCT GGGTCGCGGA CATTGACAAG
GAACGTCGAC GGGTCGGATT GAGCCTGATA CGACCTCAAC CCTCTCTGTA A
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| Protein sequence | MPSPAPLTDR IAQALQLRPA QVEAAVRLLD EGNTIPFITR YRKEATGNLD EEKLRLISEE
LTSGRQLEER ASAITRLLQQ QQQLTPELEA SIRGATSLKQ LEDLYLPFRP KRKTRATIAR
QRGLEPLATR ILHDDRTLGD LQQAAKSFIS TEQGLNSVEE VLSGAQDIIV EWISENSAVR
EACRQVLRQT GRLQSTGIEK ATPQMQAEYR DYLDFSDMIM KIPPHRLLAL NRGEREEVLR
IKVSWDKHRA QFVTGKILNV DARCYNQFMN EAIAEALERH LLPSLDRELR KDVTLKAEKH
AIDVFARNLR NLLLQPPLSP QRVLAIDPGL RTGCKLAVLN ETGDVLALDV VYITGNADRQ
LEARNKIVQL VREHGIKTIA IGNGTACRET EELVAQAIRD ELPDVHYIIV NEAGASIYSA
STIAREEFPE LDATARGTIS IARRLLDPLS ELVKIEPQHL GVGMYQHDIP PKQLKSALDG
VVESCVNYVG VDLNTASASL LRYVSGLNQL LAKRIVDRRK VRGPFRNRAE LLEVQGIGPT
IFTQAAGFLK VAGSEPLDGT WIHPESYPAT KTLLEKLQVP LVELTGENST NLWRSQLLQQ
AEQIKQQPTE LERLASDVHV GMETLRDILD SLLRPGRDPR LDLPKPVFRQ DILRFEDLAE
GVELEGTILN VVDFGAFVDI GLKDSALIHV SKMSNQFIRN PHEIVSVGDR VTVWVADIDK
ERRRVGLSLI RPQPSL
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