Gene Plim_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2390 
Symbol 
ID9139101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3112918 
End bp3114339 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content53% 
IMG OID 
ProductFeS assembly protein SufB 
Protein accessionYP_003630415 
Protein GI296122637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACAG ATCTCAGCAG TTCGACCAGC GATGACCTGG GGATCGGCGA ATATCAGTAC 
GGGTTTCATG ACTCTACTGA CAATTACACG TTCAAGAGCC GCAAAGGGCT GGATCGTGAG
ATCGTCGAGC AGATTTCCGC AATGAAGAAA GAACCGGCAT GGATGCGTGA CTTCCGCCTG
GAAGCTTACG ACATCTTCCT TTCCAAGCCG ATGCCGACCT GGGGTGGTGA TCTCTCGCAT
CTCAACTTCC AGGACATTCA TTATTACATG AAAGCATCTG ACCGGCAGGA ACAGTCGTGG
GATGACGTTC CCGACGACAT CCGCAAGACC TACGATCGAC TGGGTATTCC TGAAGCCGAG
AAGAAGTATC TCGCTGGTGT GAAGGCGCAG TACGAATCGG AAGTGGTGTA CGGCAGTCTG
CAGGAAGATC TAGCCAAGAA GGGTGTGGTC TTCACTGATA CTGACTCGGC CATTCGGGAT
TATCCTGAGC TGGTGCGGGA ACACTTTGGT ACGGTCATTC CGTCATTCGA CAACAAGTTT
GCTGCTCTCA ACTCAGCGGT GTGGTCGGGT GGTTCGTTTA TTTATGTCCC CAAAGGGGTC
GAGATCGAGT TTCCACTTCA GGCCTATTTC CGCATTAACT CCGAGAATAT GGGCCAGTTT
GAGCGAACGC TGATCATTGT GGATGAAGGA GCCTCCGTCC ATTATGTCGA AGGCTGTACG
GCTCCTACTT ACAGCAGCGA AAGTCTGCAC TCGGCTGTGG TCGAAATAAT CGTCAAGCGA
AATGCCCGTT GCCGGTACAC GACGATTCAG AACTGGTCGA ACAATGTCTA CAACCTGGTG
ACCAAGCGGG CCATGGCCTA TGGCAATGCA CTCATGGAGT GGGTAGATGG CAATCTGGGT
TCTCAACTGA CGATGAAGTA TCCTGCGATC TACCTGATGG AACCGGGTGC TCGCGGCGAG
ACACTTTCGA TTGCCTTTGC CGGTAAGGGT CAGCATCAGG ATGCGGGTGC CAAGATGGTG
CACTGCGCAC CGAATACTTC GAGTCGGATT GTTTCCAAGA GCATTTCGAA GGCGGGTGGT
CGAGCCAGTT ATCGCGGGCT TGTCAAAGTG GAACCACACG CCACAAATTG CAAATCGAAT
GTGGTGTGTG ACGCCCTGAT TCTCGATGCG GACAGCCGCA GTGATACCTA TCCGTATATT
GAAATCGAGC AGGAGCATGT GGCGATCGAG CACGAAGCTT CGGTTTCGAA GATTGCTGAA
GAACAGCTGC TGTATCTGAT GAGCCGCGGC CTGACGGAAG CCGAAGCCTC GGCCATGATT
GTGACCGGGT TTATTGAGCC TCTGGTCAAA GAGTTGCCCA TGGAATATGC CGTCGAAATG
AATCGACTGA TCGAGTTGCA GATGGAAGGC AGCGTTGGCT GA
 
Protein sequence
MATDLSSSTS DDLGIGEYQY GFHDSTDNYT FKSRKGLDRE IVEQISAMKK EPAWMRDFRL 
EAYDIFLSKP MPTWGGDLSH LNFQDIHYYM KASDRQEQSW DDVPDDIRKT YDRLGIPEAE
KKYLAGVKAQ YESEVVYGSL QEDLAKKGVV FTDTDSAIRD YPELVREHFG TVIPSFDNKF
AALNSAVWSG GSFIYVPKGV EIEFPLQAYF RINSENMGQF ERTLIIVDEG ASVHYVEGCT
APTYSSESLH SAVVEIIVKR NARCRYTTIQ NWSNNVYNLV TKRAMAYGNA LMEWVDGNLG
SQLTMKYPAI YLMEPGARGE TLSIAFAGKG QHQDAGAKMV HCAPNTSSRI VSKSISKAGG
RASYRGLVKV EPHATNCKSN VVCDALILDA DSRSDTYPYI EIEQEHVAIE HEASVSKIAE
EQLLYLMSRG LTEAEASAMI VTGFIEPLVK ELPMEYAVEM NRLIELQMEG SVG