Gene Plim_2270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2270 
Symbol 
ID9138975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2932163 
End bp2932903 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function DUF901 
Protein accessionYP_003630295 
Protein GI296122517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00783203 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAT ACTACCATCT GATTGATGGC TACAACCTGA TGCACGCCGC AGGAATTGCG 
CGTGTCCGGT ATGCCAGAGG CGATCTTGAA CGCTGCAGAA ACCGCTTGCT GCTCAGGGTG 
AGCGAACTCC TGACCGAAGA CGAACGGCAA CGAGCCACCG TTGTATTCGA TGCCCGTGAA 
GCACCGCCGG GAAGTATTCG TCGGCACATC TATCGTGGTA TGAATGTCGA ATTTGCTGAC 
CCTGGAACCG AAGCCGATGA CCATATTGAG ATCTTGATCT CCAATCATTC GGCCAGCCGA 
CAACTGTTGC TGGTATCGAG TGATCACCGA TTGCAGCGGG CTGTCAAACG ACGTCATGGA 
CGCTCGATTG ATAGTGAAGA GTTTCTTCGT GTCTATACCC AGCGTGAACT GATGCGCGAG 
CATGAGCCAC ATGCGGACGA ACAATCACCT CCAGCCACGA TCGGTCAGCA GAAAGATCTT 
GAATTCTGGC TCGATGAGTT TGAAAACGTC GATCCACGCC AGATTCTCCG TGAGTTGCCT 
AAAGAGATCT CTGAGAGCAG GTTTCTTCCT CCCGAAGAAA AGCCTGGAGC CTCTGCACCT 
GAAACGCCTG CCAATTACGA AATTGATCCT GCCCTCGAAC GAACTCGATG GGAGCAAGAA 
GTCGATGAGC TTCAGGATCT GCTCGATGAT CCGCAGCGGG TCAAAAACTG GATCGATGAT 
CCCGATTTCA GGCAGCACTA A
 
Protein sequence
MARYYHLIDG YNLMHAAGIA RVRYARGDLE RCRNRLLLRV SELLTEDERQ RATVVFDARE 
APPGSIRRHI YRGMNVEFAD PGTEADDHIE ILISNHSASR QLLLVSSDHR LQRAVKRRHG 
RSIDSEEFLR VYTQRELMRE HEPHADEQSP PATIGQQKDL EFWLDEFENV DPRQILRELP 
KEISESRFLP PEEKPGASAP ETPANYEIDP ALERTRWEQE VDELQDLLDD PQRVKNWIDD 
PDFRQH