Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2028 |
Symbol | |
ID | 9138731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2629721 |
End bp | 2631574 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Outer membrane protein-like protein |
Protein accession | YP_003630055 |
Protein GI | 296122277 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.950233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGAT CCGGACAAGC ATGGATGCTT GTTGGTTGCC TGGTGATAGC CGGATGCTCA ACCGCTCGTA CAAGTGTGGT TCGCTCCATC TCACCAGCAT CGTCGTCGGT CGAGAAATCG ACCGTCGCCA ATCACAAGAT CTCCGAAGAA AACACCACCG GCAAAGAGAC CAGTTCTCGA TACACAACCA ACAAAACTGC CTTCCCACCT GAAATTCCAG AAGATCCGGT GCCTGCGGAA GAGACCTCAT CCACGATTCA ACTTGCCAAT TCTGAAGTGC TGGATGCAGA ACCTGCAGGT GCAACGGCTG CTGAGCAGAC CGCTGCTTTA CAGGGAGCAT CGTCCCCACC AGGTCAAGTC AGCACACCTC CCGCCGGTGG AGGCGATGAG TTTATGGAGG GATCCTTGCT CCCCGGAAAG ATCCGCCAGG AGATTCCTCC CAGCCCCGGG AATGCCGATG AGATTCCTAT CGTAGGTGAT GAGCGAGTCA GTCCACCCCT GGTACTCAAC AGTGTCATCG ACTCGGTCTA CATGTCGTTT CCTCTTTTAA GGAATGCACT TTATGGCCGC AATATTGCCA ATGGAGCCAA TCTCGCTGCC CAGGGAGCTT TCGACCTCAA GCTGAATGCT GATTTGAATA ACCAGCCCCT GGGTTACTAC CAGACGTATC GGAATGGTGT CGATATTGCC CAGCCCGTGC TCCAGAATGG TGGAGAAGTG ATTGCCGGGT ATCGCGCGGG TCGTGGTAAC TTTGAACCAT GGTACGGAAA TCGCGAAACC AACGATGGGG GCGAGTTCAT GGCTGGCCTG GCGATCCCAC TTTTGCAGAA CCGTGCGATT GATAAACGCC GCGCTGAACT CTGGATTACT CAGGTTGGTC AATCAAAAGT CGAACCAGAG ATTAAAACCC AGCTCCTGCA ATTTATTCGT GATAGTACAA TTGCCTATTG GGAATGGGTG GCCGCAGGGC AGGGGCTGCG AGTGGCTCGT GAGCTGCAGG CACTGGCACT GGATCGAGAT CAACAGATCC GCGCGACAGT CCAGGAAGGT GATCGTCCCG AATCAGACAT TATTGATAAC CAGCGTTTAA TTGTTGCCAG ACAGGTCAAG CTGATTGAAG CGGAACAAAA GCTTCAAAGC TCGGCCGTCA AGCTCTCACT CTATTTGAGA GATGCTGCTG GCAATCCCTT TATCCCTTCC AACAGCATGC TGCCTGCGAG GTTTCCAACT CCGATGCTGG TGACACCCGA GGTACTGGAA GCCGATATTG CCTTCGCTAC CTCTCGCCGG CCGGAATTGC TGGCACTCGA TTTCGACCGT CAGCAATTGT CTATCGAGTT ATTAAAGGCA CAGAACGAAC TGTTACCCAC ATTGGGTGCC CATGTCCTGG CCAAAAAAGA TGTCGGCGGG CCAACCAGCT CGATCAATGA TAAAGGTCCC TTCCAGGGAG AAGCCGGCTT GCAGTTTACC GTTCCTCTGC AACGTCGAAA CGCCAACGGC AAAATCATGA TGGTCGAAGG GAAGCTGGCT CAGAATATGG CCAAACGCCA ATTCACGGCT GATAAAATTT CCGTCGAAGT TCGCACTGCC GTCATTGCCC TGGAAAATGC CTATCGTGCC ATTGGTCAGG CCAGTGCTTC TGTCCGTCTC AACGAAGAGA TGCAACGATT TGAAACCATT CGATTAAATG AGGGCGCGAG CGATCTCTTG AGATTGAACC TGCGCGAGCA GGCCACCTTT GATGCTCGTG TTCAGGAAGT TCTCGCCCTG CTAGGTTACT TCGCCGCAGA GGCTGACTAT AAGGCCGCAA CTGCGGCTGA ACTCCCCGAA GAAATCCTGG TTCCCGCCAA CTAA
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Protein sequence | MTRSGQAWML VGCLVIAGCS TARTSVVRSI SPASSSVEKS TVANHKISEE NTTGKETSSR YTTNKTAFPP EIPEDPVPAE ETSSTIQLAN SEVLDAEPAG ATAAEQTAAL QGASSPPGQV STPPAGGGDE FMEGSLLPGK IRQEIPPSPG NADEIPIVGD ERVSPPLVLN SVIDSVYMSF PLLRNALYGR NIANGANLAA QGAFDLKLNA DLNNQPLGYY QTYRNGVDIA QPVLQNGGEV IAGYRAGRGN FEPWYGNRET NDGGEFMAGL AIPLLQNRAI DKRRAELWIT QVGQSKVEPE IKTQLLQFIR DSTIAYWEWV AAGQGLRVAR ELQALALDRD QQIRATVQEG DRPESDIIDN QRLIVARQVK LIEAEQKLQS SAVKLSLYLR DAAGNPFIPS NSMLPARFPT PMLVTPEVLE ADIAFATSRR PELLALDFDR QQLSIELLKA QNELLPTLGA HVLAKKDVGG PTSSINDKGP FQGEAGLQFT VPLQRRNANG KIMMVEGKLA QNMAKRQFTA DKISVEVRTA VIALENAYRA IGQASASVRL NEEMQRFETI RLNEGASDLL RLNLREQATF DARVQEVLAL LGYFAAEADY KAATAAELPE EILVPAN
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