Gene Plim_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1988 
Symbol 
ID9138690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2582410 
End bp2583252 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF191 
Protein accessionYP_003630017 
Protein GI296122239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAATC GAACCCTTAT TCGTGTTGGC CATAGTCCTG ATCCTGATGA TGCCTTCATG 
TTTCATGCAT TGGCGAACGA TAAAATTCCG ACCGGCCAGT ACGTTTTCAC TCACGAACTT
CAAGATATCG AGACGCTCAA TCAGCGGGCC TTCCGTGGGG AGTTAGAGCT TTCCGCTGTC
AGTCTGCATG GTTACGCCTA TTTGACCGAT AAATACGCTT TATGTGCCTG TGGCTGTAGC
ATGGGAGATA ATTATGGCCC AATGGTTGTC GCTCGTCAGC CGATGGAAAT TGACGATCTG
ATTGGCAAGA GAATTGCCAT CCCTGGAAAG TTGACCACAG CCGTTTTGTC GTTGCGATTA
CTGCTCGGAG ATCGATTTAC TCCCGTACTT TATCCCTTCG ACGAGATTCT GAATGTGGTC
GAGCGTGGTG AAGTTGATGC GGGACTGATC ATTCACGAAG GCCAGTTGAC ATACGCCTCT
CAAGGCTTAA GCCTAGTGGT CGATCTGGGA AAATGGTGGC TGCAGAAGAC AGGTCTTCCT
CTGCCACTGG GAGGTAATGC CATCCGCCGT GATCTGGGCC GCAAAGCGAT GGAAGAAGTC
ACGGCTCTGC TCAAACAGAG CATTGTCTAT GGTCTTGAAC ATCGCCAGGA AGCGTTAGGC
CACGCCAAGA AGTATGGTCG AGATCTAGAT GACCACAAAG CCGATGTCTT TGTAGGTATG
TACGTGAACG ACTGGACGAT CGACTTTGGA GATCGCGGCC GTGAAGCTGT GAAATTGCTG
CTGGCGAGAG CTTATGAACA CAAACTCATT CCGCATCCGG TCGAGTTAGA GTTCATTGGC
TGA
 
Protein sequence
MDNRTLIRVG HSPDPDDAFM FHALANDKIP TGQYVFTHEL QDIETLNQRA FRGELELSAV 
SLHGYAYLTD KYALCACGCS MGDNYGPMVV ARQPMEIDDL IGKRIAIPGK LTTAVLSLRL
LLGDRFTPVL YPFDEILNVV ERGEVDAGLI IHEGQLTYAS QGLSLVVDLG KWWLQKTGLP
LPLGGNAIRR DLGRKAMEEV TALLKQSIVY GLEHRQEALG HAKKYGRDLD DHKADVFVGM
YVNDWTIDFG DRGREAVKLL LARAYEHKLI PHPVELEFIG