Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1972 |
Symbol | |
ID | 9138674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2562990 |
End bp | 2566322 |
Gene Length | 3333 bp |
Protein Length | 1110 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | heme-binding protein |
Protein accession | YP_003630001 |
Protein GI | 296122223 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGAT TGAGTTTTCG AGTCGCCATG CTGGCTTGGG TTTTTGCCGC AGCGTTACCT TTGATTCCGG AATCTTTTGG GCAGGAGACC TATTCGCCAC CGATCAGTGA AAAGTCAGAT GAAGCGGAAC TGGCGAAATC TCGATTCAAA TTCCCCAAAG GCGTTGAGGT CAAGCTGGCT GCTTCAGAGC CGGAAATTGC CAACCCTGTC GCTTTCTGTT TCGACGAACA GGGAAATCTC TATGTGGCTG AGACATTCCG GCAGAGCAAA GGTGTAGAAG ACAATCGCAG CCATATGAAC TGGTTGCAGG ATGACCTTTC TGCACAGACT GTCGCCGACC GCGTGGCCTA CATGCGAAAG CACATTCCCG ATGCTGACAA GCGCTACACC AAAGAACACG ATCGCATTCG AAAACTCGAA GATCGCGATG GTGATGGGGT CTACGAAACC GCCACTGTCT TTGCTGATGG GTTCAACGAT ATCGCAGACG GGACAGGTGC GGGCATACTC GCATGGAATG GAAACGTCTA TTACACCTGC ATCCCCAAAC TCTGGATGCT CACCGATACC AACGGCGATG GCGTAGCTGA TCAGAAAAAA GTGCTCAGCG AAGGCTATGG GGTAAGGTTC GCTTTTCGTG GGCACGATTC CCACGGCTTA GCCATTGGTC CCGATGGCAG GCTCTATTTC AGCATTGGTG ACCGCGGCTA CAACATCACA ACTCCTGAAG GCAAGCTCGT TAATCCCGAC CGTGGGGCTG TTTTTCGATG CGAACCCGAC GGCAGCAACC TTGAAGTCTT CGCCACCGGA TTACGCAATC CTCAGGAACT GGCGTTTGAT AATCGCGGAC GCCTTTTCAC TGGTGACAAC AACTCAGATG GTGGCGACAA AGCCCGTTGG ACATACGTCA TGCGTCAGAG CGATACCGGC TGGCGCATGA ACTACCAATA TCTCAACGAT CGTGGTCCCT GGAATCGTGA GAAGCTCTGG CATCCGGCTC ATCCGGAACA GGCTGCCTAC ATTGTTCCAC CCATTTTGAA CTTTTCCGAT GGGCCATCAG GTCTGACTCA TAATCCGGGA ACCGGCCTGC CCGCCAAGTA TGACGACTGG TTTTTTCTAG CCGATTTTCG CGGGACACCT GCTATCAGCG GGATCCGCGC ACTGGTGAAT AAGCCCAAGG GGGCTGGATT TGAGATTGCC GAATCAGAAA TGTTCATCTG GGGCATTCTC GCGACTGATG TCGATTTCGG ATACGACAGC AATCTCTACG TCACCGACTG GGTCAACGGT TGGGAAGGCC TCGGTAAAGG CCGCGTTTAT CGATTTGCCG ATGCTGCAAA CACCTCCGGT AGTGAAGTCG CAAAACTCTT CCGCGAAGGT TTTACAGATC GATCGATCGA GGATCTGACA AAGCTGTTGT CTCACGCTGA TTATCGCGTG CGGCAGCGAG CACAGTTTGC CCTGGTTTCC AGGCAAGCCA CCCAAGTGCT GGCTCAACAG GCGACAAAGA GCTCGTCCAC TTTTGCCAGA CTGCATGCCA TCTGGGGCCT GGGGCAACTG GCGCGACAAA AACTTCCGAC TGCAGAACTG CTTCTCCCGC TCCTGGCGGA TCCTTCAGCC GAAGTTCGCG AAGCCACTTG CGTCGCTTTA GGTGATCTTC GCTATCAACC TGCTGCTGCC CAGTTGGGAA AGCTGCTGAA AGATGCCGAT GCTCATGTCC AGGCGCAGGC AGCGATTGCC CTGGGCCAGT TGAAAGGGCA CGGTCAGGAA AAAGCCTTGG TTGAAGCTCT GACATTAAGC AACAACACAG ATCCGTTTTT GCGACACGCT CTGGTTGTGG GTCTGACAGG TGTGGGTGAT TCCCAGCAGA TTGCGGCACT TTTGAAGAAT CCCTCCCCTG CCGTCCGCCT GGCTGCCGTG GTGGCATTAA GGCGTATGGA ATCTGCCGAT TTAGGTATGG CCCTCTCCGA TGCCGACCCC CTCATCGTGC TCGAAGCGGC CAGAGCCATC CATGACCTCC CGACGACGAC TCATCTGGAA AAACTGGCGG CTCTGCCCAT CGCTGGAACA ACTTCTGACG CGCTTGCCCG CCGGATTCTG AATGCGAGCT ATCGTATCGG CAACGTTGAA TCAGCCTTAC GGGTGGCACA GGTTGCAGCG AATTCTTCGG TGTCAGACTC ATTGCGGATC GAAGCGATTG AAGAGCTCCT CAACTGGAAT AGCCCTGCTG TGCTTGATCG TGTCTTGGGT GATTATCGCC CACTGGCCAC ACGAAATGTG GAGATTGCTG ACGCCATCAG ACCACTTCTG ACGTCGATGC TTGCCAGCCC GACCAAAGTT CGAGAAGCAG CCACCAAGCT CGCCGCCAAG TATGGCATCG AGGAAGTTCA GCCCATTCTG CGAGAAGCGG CTCTCTCGGT GAAAGCCGAA AGTTCCGAAC GATTGGCAGC ACTATCCGCT TTGAAATCAT TGAAAGATTC TCAGCTGACA GAAATCGCCT CGAAGCTGAT TGATGATGCG AACCCGGAGG TTCGAGCCGG TGCTGCTGCC GTCCTTGTCA AACTGGATGG TGCTCGATCT TTGAAATACC TGGAAACATT GACGCCCCAA TCCCCCTCCG TCGAGGTGCA ACAGGGGATC GCCACGTTGG CCAGTCTGTC GGATGAACAA GCACAGAAAA CGCTGGACGC CTGGTTCCTT CGACTGGCAG ATCGGTCAGC ACCTCCGGAA GTCTGGCTGG ACTTAATTGA AGCTGCTCAG AAGAAAAAAT CGGAAGTCTC GAAAAAGGCA CTCGCCAGTT TTGAATCTTC ACGAGACGCC AATGATCATC TCTCGAAACA TCGTGAACTT GTGGCTGGTG GTGATATCGA ACGTGGTCGA GATATTTTCT TCAATCGCAG TGAAGTGAGT TGCCAGCGTT GCCACAAAGT CGGTTCTCAA GGTGGCGAAG TGGGGCCTGT CCTGACAAAA ATTGGTGCCG AAAAATCGTC AGAGTATCTG CTCGAAGCAA TTGTCGATCC CAATCGAGTG ATTGCCAAGG GCTTTGAAAC AGCCATTCTC GGTATGGAAG ATGGCCGTGT GCTGGTGGGA ATTATCAAGT CTGAGAGTAA TGGAAAACTG ATTCTGCAGC CCGCTGAAGG GCAACCCATC ACGGTCAATG TGGCGGAAAT CGAAGAACGC TCAGTGGGTA AATCCGGCAT GCCCGAAGAT CTTGCGGGCA AGATTTCCCG CCGAGATTTA AGAGACCTTG TCGCTTACCT GGCAAGTCTG AAGCGGGATG TTGATGCCGC TGCTCACGGC TCAAGTTCGG CCCATGGTGC GGCACATCCG TAA
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Protein sequence | MDRLSFRVAM LAWVFAAALP LIPESFGQET YSPPISEKSD EAELAKSRFK FPKGVEVKLA ASEPEIANPV AFCFDEQGNL YVAETFRQSK GVEDNRSHMN WLQDDLSAQT VADRVAYMRK HIPDADKRYT KEHDRIRKLE DRDGDGVYET ATVFADGFND IADGTGAGIL AWNGNVYYTC IPKLWMLTDT NGDGVADQKK VLSEGYGVRF AFRGHDSHGL AIGPDGRLYF SIGDRGYNIT TPEGKLVNPD RGAVFRCEPD GSNLEVFATG LRNPQELAFD NRGRLFTGDN NSDGGDKARW TYVMRQSDTG WRMNYQYLND RGPWNREKLW HPAHPEQAAY IVPPILNFSD GPSGLTHNPG TGLPAKYDDW FFLADFRGTP AISGIRALVN KPKGAGFEIA ESEMFIWGIL ATDVDFGYDS NLYVTDWVNG WEGLGKGRVY RFADAANTSG SEVAKLFREG FTDRSIEDLT KLLSHADYRV RQRAQFALVS RQATQVLAQQ ATKSSSTFAR LHAIWGLGQL ARQKLPTAEL LLPLLADPSA EVREATCVAL GDLRYQPAAA QLGKLLKDAD AHVQAQAAIA LGQLKGHGQE KALVEALTLS NNTDPFLRHA LVVGLTGVGD SQQIAALLKN PSPAVRLAAV VALRRMESAD LGMALSDADP LIVLEAARAI HDLPTTTHLE KLAALPIAGT TSDALARRIL NASYRIGNVE SALRVAQVAA NSSVSDSLRI EAIEELLNWN SPAVLDRVLG DYRPLATRNV EIADAIRPLL TSMLASPTKV REAATKLAAK YGIEEVQPIL REAALSVKAE SSERLAALSA LKSLKDSQLT EIASKLIDDA NPEVRAGAAA VLVKLDGARS LKYLETLTPQ SPSVEVQQGI ATLASLSDEQ AQKTLDAWFL RLADRSAPPE VWLDLIEAAQ KKKSEVSKKA LASFESSRDA NDHLSKHREL VAGGDIERGR DIFFNRSEVS CQRCHKVGSQ GGEVGPVLTK IGAEKSSEYL LEAIVDPNRV IAKGFETAIL GMEDGRVLVG IIKSESNGKL ILQPAEGQPI TVNVAEIEER SVGKSGMPED LAGKISRRDL RDLVAYLASL KRDVDAAAHG SSSAHGAAHP
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