Gene Plim_1710 details

Gene Information

• Locus tag: Plim_1710
• ID: 9138411
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 2220242
• End bp: 2222341
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 53%
• Product: 60 kDa inner membrane insertion protein
• Protein accession: YP_003629739
• Protein GI: 296121961

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.895554
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAAC GTCGCTTCCT GACCTTTATC GCTCTTTCAG CTCTGGTCAT CTTTGGCTGG 
TCGGGCTTTG TCATGCCCAT GCTGTTTCCG CCTCCTCCCA AGGCTGAAAA GCTGGCTGAG 
AAAGCACCAG AAGATCAGGC TGCTGATATT GCCAAGCCTG AGGAACTTCA ACCCGCCGAT 
GCGCTGGTTC CTGCGAATGT CATCGCGAAA GCTGGTGCAG ATGCCAACCA GCCAGAAGCG 
CCTGCGCAAG AAAAAGTTGT CGAACCTCCC AAACTGCAGT CGTTCCCCAA CCGACAGATC 
CTGCTGGGGT CGACGAATCC GGACGAGCCA TTCTTTCTGG CCGTGAAGCT GAACAGTCGA 
GGTGGTTCCA TTGAAACCAT CGAGCTGAAT GATCCGCGTT ATCGATCTCT CGATGACAGC 
AGCAAGCCCG TCAAGGTGGT CGGAGATGAT CCACTGCTCA AATTGAAAAC CACAGATGTG 
ACAATTGAGG CGATTGACCG CCAGTTGGCT GCATTGGGCT TGAGTCTGGC GAAAATTGAT 
TGGGAAGTTG TCCCTGGTAG CGAAAGCCCT GAAGGTGTGA CTTTTCGATT CACATCGCCC 
GATGGTTCGA TTCAGCTTGA GAAGGCTTAT CGATTGCCCA AAGTCCCGGG GTTGGCTGGC 
AAGGAGCCTA CAAAAACCGA ACGCGATAAT CTGGGGCAGG GTTATCTGCT CGATTACAGC 
CTGACCGTCA GAAATCTCAC GGAGAATCCT CGCGAAGTCA GATACACCAT GCAGGGGCCT 
GTCGGTGTCC CTCTGGAAAA TCCGGAAAAC GTCACTAAGT ATCGTGATGT TCGCGTTGGG 
TTTGTTCTTC CGGATGGAGA ATCTGTCGAG TCATCGCATC AATCGGCTAC AGAAGTGCTG 
GACGCGGAAT CCTCAGGTAA GCCTTCTGTC TGGACTCGTC CGATTGAGTA TGTCGGGGTG 
GATGCCACTT ATTTCGCTTC TCTGGTGCAT CCTGTTGAGA ACCAGATCAA GGAACGTACG 
ATTGAAAGTG TTCAATCTCA GGTCACTTAT CCTGCCCAGG AGAAGCACTT CAGTGATGTG 
TCAATCGAAT TGACTTCAGT GCCGATTCAA CTGGCTCCTC AAGGCACTGG CCCGAACGCG 
GAAGCGACGC ATCATTTCCA GCTTTATGCC GGCCCGAAGC GTGCCCATCT GATGGCTGCC 
GTGGGAGCTG CTGATGTCAC GGAGTATCAC ATCGGCTGGA ATCCCTTCTT TTTCCTCGAG 
CCATTGGTTC GCCTGCTGGT GATCCCGATG CTGGCACTGC TCAATGGCCT GCACGCCCTT 
GGCATTAATT ACGGGATTGC CATCATCCTG TTGACGATCA TTGTGCGAAC CTGCCTCATG 
CCTCTGACTC GCAAGCAGGC ACAAAGCGCA CAGCGGATGA AGGAGATGCA GCCCAAGCTC 
AAGGAACTGC AAAAGAAGTT CGCCGGTGAT GCCGACGGGC TTCGCCGTGC ACAGCTGGAA 
CTTTACAGCA AGCATGGCTT CAACCCCCTG GCTGGTTGCT GGCCAGTGTT ACTGCAAATG 
CCTATTTTCT TTGCCCTTTA TCGGGCATTG AGTGTCTCCG TCGATTTGCG GCGTGCCTCA 
TTCCTGTGGA TCGACAACCT CGCGGCACCC GATGCTCTCT TCGAGCTTCC TTTTCGTGTC 
CCGTTTCTCG GATGGACAGA ATTCAATCTA CTGCCCATTT TGACGATCAT CCTGTTTGTC 
GCTCAACAGA AGATCTTGAT GCCGCCACCT GCTGATGAAG AGCAGGCGAT GCAGTACCGC 
ATGATGAATA TCATGATGGT CATGATGGGA GTGATGTTCT ATCGTGTGCC GGCGGGGCTG 
TGCATTTACT TTATCACTTC CAGTCTGTGG GGCATGGCCG AACGCTGGTT CTTCGATCGC 
ATGAACGAAT GGTATCCAGC CAAACCGGTC GAAGTGAAAG AAAAGAAGCC ATCGGCTGTC 
GCCAAATTCT GGCAGCAGGC TTTGGAAGCA GCCGATCGTC AGGCCGAACA GGCCCGTCAA 
ATGCCATCGG CAGGAGCGAA TTCTTCATCG AAGAATGGTC AAAACGGTAA AGGCCGATAG 

 

Protein sequence

MEQRRFLTFI ALSALVIFGW SGFVMPMLFP PPPKAEKLAE KAPEDQAADI AKPEELQPAD 
ALVPANVIAK AGADANQPEA PAQEKVVEPP KLQSFPNRQI LLGSTNPDEP FFLAVKLNSR 
GGSIETIELN DPRYRSLDDS SKPVKVVGDD PLLKLKTTDV TIEAIDRQLA ALGLSLAKID 
WEVVPGSESP EGVTFRFTSP DGSIQLEKAY RLPKVPGLAG KEPTKTERDN LGQGYLLDYS 
LTVRNLTENP REVRYTMQGP VGVPLENPEN VTKYRDVRVG FVLPDGESVE SSHQSATEVL 
DAESSGKPSV WTRPIEYVGV DATYFASLVH PVENQIKERT IESVQSQVTY PAQEKHFSDV 
SIELTSVPIQ LAPQGTGPNA EATHHFQLYA GPKRAHLMAA VGAADVTEYH IGWNPFFFLE 
PLVRLLVIPM LALLNGLHAL GINYGIAIIL LTIIVRTCLM PLTRKQAQSA QRMKEMQPKL 
KELQKKFAGD ADGLRRAQLE LYSKHGFNPL AGCWPVLLQM PIFFALYRAL SVSVDLRRAS 
FLWIDNLAAP DALFELPFRV PFLGWTEFNL LPILTIILFV AQQKILMPPP ADEEQAMQYR 
MMNIMMVMMG VMFYRVPAGL CIYFITSSLW GMAERWFFDR MNEWYPAKPV EVKEKKPSAV 
AKFWQQALEA ADRQAEQARQ MPSAGANSSS KNGQNGKGR