Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1674 |
Symbol | |
ID | 9138375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2170976 |
End bp | 2171740 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003629704 |
Protein GI | 296121926 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATT TAACCAATAA GATCGCCCTC GTCTCCGGGG CCTCACGCGG CATTGGTCGC GCGACAGCAT TGCAACTTGC CCGCGCCGGG GCTGACGTGG TCATCAATTA TGTACAATCT CGCGACAGTG CTGACCGAGT GGCAGAAGAG ATCGCCGCCA TGGGCCGCCG CGTGGCCATT GTCCGTGCGG ATGTCAGCGA GCAGAGCGAT GTTCAGAGCA TGATGGAATT TGTGGGCAAT GAATTTGGCA GGCTCGACAT TCTCGTCAGT AATGCTGCAT CGGGGGGATT CCGCCCCTTG CTGGCGGCCA CTCCCAAGAA TTTCGAAGCC GCGATGAATA CCAATGTCCG CGCACTTCTA TTCCTCGTAC AGGCCGCACA TCCTTTGTTG GGGCAAAGTG TCGATCGAGC CAAGATTGTG GCCATTTCGA GCCATGGCTC ACACATGGCA CTCCCATGGT ATGGCCTGAT TGGTACCTCC AAAGCAGCAC TGGAAAGCCT GATTCGCCAC ATGGCACTTG AGTTTGGCGA CCAGGGAATG AACTTCAACG TCGTCCAGGC GGGACTGGTT CCCACAGACT CCACCAAGAT GATTCCTGGC TCCGAAGTCA TGTTCAATGC GCGAAGCTCC AAGACCATGA TGGGTGATCG CCAACTGGAA CCCGAAGACG TTGCGAACGC AGTCCTTTAC CTTTGCAGTC CACTGAGCGA TCTGGTGCAA GGGCAAGTCT TGATCATCGA CGGCGGGGCC GCCATTCACG TCTAA
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Protein sequence | MIDLTNKIAL VSGASRGIGR ATALQLARAG ADVVINYVQS RDSADRVAEE IAAMGRRVAI VRADVSEQSD VQSMMEFVGN EFGRLDILVS NAASGGFRPL LAATPKNFEA AMNTNVRALL FLVQAAHPLL GQSVDRAKIV AISSHGSHMA LPWYGLIGTS KAALESLIRH MALEFGDQGM NFNVVQAGLV PTDSTKMIPG SEVMFNARSS KTMMGDRQLE PEDVANAVLY LCSPLSDLVQ GQVLIIDGGA AIHV
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