Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1569 |
Symbol | |
ID | 9138269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2022674 |
End bp | 2023417 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003629601 |
Protein GI | 296121823 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.169085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTC AAATTGCAGA TCGAGTTGTG CTGGTCACTG GTGCCAATCG CGGAATTGGA AAATCGATTG TCGAAACACT TCTGGCCCAT GGGGCGAAAA AGGTCTATGC CGGTGTGCGG GAGTTATCCA AAGCCAAAGA CCTGGTTGAG CTGGGTCAGG GTAAGGTGAT ACCCATCATC ATCGATCTGG CAAACCGAAC CACGATCGAC CAGGCAGCAG CTGATGCCCA GGATGTCGAG TTGGTTGTGA ATAACGCCGG GATTGCCCGA ACAACATCCC TTTTCAGTGA GCAGGTGTAT GGATCGCTGG ATGAAGAATT GAAAGTCAAC CTGTATGGCG TCATTGCCAT GGCCAGGGCT TTTGCACCAG TTCTAAAAGC GAATGGTGGG GGAGCGTTCG TGCAACTCAA TTCGGTGGTG TCGATCAAGT CTTTTGGAGA CTTTGCCACC TATAGTGCTT CCAAAGCCGC TGCCTACTCG GTCACTCAGG CCATTCGCGA TGGGCTTAGA GAACAAGGGA CATTAGTGGT CAGCGTCCAT CCGGGGCCGA TTGCGACCGA TATGGCAGCA GCCGTCGGGT TATTGGAAGT CGCTGATCCT CCCGCGGTCG TTTCTGAAGG GATCGTTCAA GCACTGGCGC AGGGTCAGTT CCATCTCTTC CCTGACAAAA TGGCAAAACA GTTCTGGGGT GTGTATGAAA ACTACGCCAG GAATATTGTG GAAGGAACAG GAACTGGTGA GTGA
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Protein sequence | MSFQIADRVV LVTGANRGIG KSIVETLLAH GAKKVYAGVR ELSKAKDLVE LGQGKVIPII IDLANRTTID QAAADAQDVE LVVNNAGIAR TTSLFSEQVY GSLDEELKVN LYGVIAMARA FAPVLKANGG GAFVQLNSVV SIKSFGDFAT YSASKAAAYS VTQAIRDGLR EQGTLVVSVH PGPIATDMAA AVGLLEVADP PAVVSEGIVQ ALAQGQFHLF PDKMAKQFWG VYENYARNIV EGTGTGE
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