Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1410 |
Symbol | |
ID | 9138105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1801235 |
End bp | 1802782 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | 4-alpha-glucanotransferase |
Protein accession | YP_003629443 |
Protein GI | 296121665 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0343019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGTG CGAGTGGTGT GCTGCTGCAT CCGACATCAT TTCCCAGTCG TTTTGGTACG GGAGATCTCG GTCATGAGGC CTATCAGTTT GTCGATTGGC TGGCTGCTGC CGGCCAATCG TACTGGCAGG TCCTCCCACT GAATCCTGTC GATGCCGGTT ATTCTCCTTA TCAAAGTCCC TCTTCGTTTG CTGGCAATCC GCTGCTCATC AGCCTGGAAA AGCTGGTTGA CGACGAACTT CTCACGCGAG AGGAACTCGA TCAGGCAGCG ATTGCCGGCG CCGATGGGAG TGGCAGTGCC AGCTTTGAAC TGGCCTTCGA GCGGAAAATG CCATTGCTGC ACCGCGCTGC GGAACGGTTT CATCAGCTTC ATGAAGACCA CGAACTTCGA GTGGCATTTC GAACATTCTG CAGTGCGCAA GCAGGCTGGC TCGATCAGAT GGCCTTGTTT GAAGCCCTGA AAGGTGCCAA TGCAGGCCGC CCCTGGACGA CCTGGACACA TCTCGTCGAT CATTGGCATT ACCCTGGGCC CGAAGCCATC ACGGTTCTTC AAGAGCCCAT CTTCGTGGCC AAGTTCCAGC AGTTCATGTT CTTCAGGCAG TGGAACGAAT TGCGTGCCTA TGCCCGAAAT AGAGGCATTC TCATCATTGG CGATGTCCCA ATTTATGTCG CTCACGACAG TGCCGACGTC TGGTCGAATC GTCGCTTCTT TCAACTCAAC GAAGCCGGGC AGGCTCTGCA GGTCGCGGGC GTACCTCCGG ACTACTTCTC GGCCACTGGT CAACTCTGGA ACAACCCGGT CTACGATTGG CGAGCACTTG AAGAAGACGA GTACCGCTGG TGGGCCAGGC GATTACAAGC CGTTATGGAA GCGGTCGATC TGGTACGGCT GGATCATTTC CGAGGGTTTG AAGCCTATTG GTCAGTTCCC GCAGGCCATG AGACGGCCGA GCAGGGTACA TGGGTCCCCG GGCCGGGGCA TCGCCTGTTT AATGCTCTCA AGTCGCAACT GCGAATACCC GAAGGGATGA CACGCCTCCC GATTATTGCG GAAGATCTCG GCACCATTAC TGCTGAGGTT GATGAACTGC GCCTTGCCTA TGGTTTACCA GGGATGAAGG TGCTCCAGTT CATGATTGCC GAGAACGATC CTTTCCAGCC TCAAGAATTT CCTCCCGAAT CGATTTGCTA CACAGGGACT CACGATAACG ACACCACGGT CGGTTGGTTC CAGTCACACG TGGCGCCCTT TGCCGATCGC TTCGATCGCC TGCGTCAACG AATCGAATTC TCGAGTGAAG ACATTGCGTG GGATCTGATT GCCGTGGCCT GGAAGAGCCG GTCGAATATC GCAATTGCAC CCCTTCAAGA TCTCCTTTCT CTCCCGGCTG CGGCCCGCAT GAATACTCCA GGAACTTTTG GCGCTTCAGC TCGTAACTGG ATCTGGCAAT ACGAACCCGG TGTGCTTACA AAAGACCTTG CTGATCGTTT GCATCGACTG ACTATGGCCA ATCATCGTTT CCTTGGAGAT CGCCCGCCAC AATTCTAG
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Protein sequence | MDRASGVLLH PTSFPSRFGT GDLGHEAYQF VDWLAAAGQS YWQVLPLNPV DAGYSPYQSP SSFAGNPLLI SLEKLVDDEL LTREELDQAA IAGADGSGSA SFELAFERKM PLLHRAAERF HQLHEDHELR VAFRTFCSAQ AGWLDQMALF EALKGANAGR PWTTWTHLVD HWHYPGPEAI TVLQEPIFVA KFQQFMFFRQ WNELRAYARN RGILIIGDVP IYVAHDSADV WSNRRFFQLN EAGQALQVAG VPPDYFSATG QLWNNPVYDW RALEEDEYRW WARRLQAVME AVDLVRLDHF RGFEAYWSVP AGHETAEQGT WVPGPGHRLF NALKSQLRIP EGMTRLPIIA EDLGTITAEV DELRLAYGLP GMKVLQFMIA ENDPFQPQEF PPESICYTGT HDNDTTVGWF QSHVAPFADR FDRLRQRIEF SSEDIAWDLI AVAWKSRSNI AIAPLQDLLS LPAAARMNTP GTFGASARNW IWQYEPGVLT KDLADRLHRL TMANHRFLGD RPPQF
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