Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1405 |
Symbol | |
ID | 9138100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1789194 |
End bp | 1790822 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003629438 |
Protein GI | 296121660 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.407034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCTCAC CTCTCAGTAC GAGTTCAACC TCGTCTACGG GTGTTCAAGC CTCTCGCAGT GAACAGTCGC AGGCGGCTCA GATCTGGCGC GAGTTCAAGA AACGAAGACT CGCAGTCTTT GCGGCCATTC TCATGATTGT CGAAATCATG ATTGCGGTCT TTGCACCGTT CATTGCGAAT GACAGGCCGA TGGCCTTTCG CGGCGTGAAT CGCTTCGAGT TCCAGCAGTT GATTCAGACT GTGGAATCTC TGATGGCAAT GGCCAACGGT GAAAGTCGCC AGGAGAGTGG GGCGGCAAAA AAGGTCTATC CAGTTCTGGA AAAGGCCCAG TCATTGCTGG AGACAGCCTC CGCAGAAATT GATGTTTCCA AGTCCGGCGG AAGCGAATCC CGCAGGCAAT TTGAGGGTTT GATCCGACGA ATTCAGGATA TGCAGAAACC CCTCGGCTCG TTTCCCGACC AGACCTCGGC CTTGCCGCCA GAACTGATTC AGGGAATTCA GGCAATTCTT ATGGATGTCA AAACGCTGAA GAAAAGCGAA TTGCCTCCAC TTCTCTCCCG CTGGTACTTT CCGGCACTCG CACAACTCAA TGGAATCGAC TTCTGGTTTA TTGCCGCTGC CATTTTCTGG CCACTTTGGT GGTTTGCCAC GCGACTCTCG ACGTTCGCTT ATCGACAACC TCGCTGGGTG CAACTGCTCG TTCTATCTGG CGTTCCCACA CTGGCTGCAG GCATTTGGGT CGAAATCAAC CCCTCTCGAC TCGATCAGAC CAATTACAAG CAAGGTGTGC TGACGGCGTA CGACTTCTCT CGCACCGCCC CGGTGATCTT CGATGTTGTC GTCTGGCCAC TGGTTCCTTT TGGCATCGAT GAGTACGACA CGACCAATCA GACAAAGCCA CCCGCCTTTT CGCTCAAGGA ACCGCAAAAG CTCGCCACGC CGTGGGATCG CCCGCACTGG CTGGGGACGA ATCACAATGG TGTCGATCTC CTGACACTTC TCATCTGGGG AGCACGCATC AGCCTTTCGG TCGGTCTGGT CGCGGTTCTG ATCTACATGT CGATCGGGAT TGTCCTCGGT GCTCTGGCGG GCTACTTCCG CGGTTGGGTC GATATTCTGA TCTCACGTCT GATTGAAGTC GTCATCTGCT TCCCGACACT ATTCCTCGTA TTGACGATTG TGGCTCTTCT GAAACCCAGC CTCATCAACA TCATGATTGT CATCGGCTTG ACCGGCTGGA CAGGTGTGGC CCGGTTAGTT CGCAGCGAGT TTTTGCGGCT GGTGAATCAG GAATTTGTGC TGGCTGGCAA GTCGATTGGC TTTTCCTCCA CGCGGCTCAT TTTCCGACAC ATCCTCCCCA ATGCCCTGGC CCCTGTGGTC GTGGCGGCGA CATTTGGTAT TGCCGGAGCC ATCCTGCTTG AAAGCTCACT GTCATTTCTA GGGCTGGGTG TCCGTGTTCC TACACCTTCC TGGGGCACAA TTCTCAGTGA AGGCCGCACT CGCCTGCTGC AGGCTCCCTG GCAGATGACG TATCCCGGAT TCGCCATTTT CATCACCGTC ACCTGCTACA ATCTGATTGG CGAGGCGCTG CGGGATGCGG CTGATCCAAG GCTCCGCGGC ACACGATAA
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Protein sequence | MASPLSTSST SSTGVQASRS EQSQAAQIWR EFKKRRLAVF AAILMIVEIM IAVFAPFIAN DRPMAFRGVN RFEFQQLIQT VESLMAMANG ESRQESGAAK KVYPVLEKAQ SLLETASAEI DVSKSGGSES RRQFEGLIRR IQDMQKPLGS FPDQTSALPP ELIQGIQAIL MDVKTLKKSE LPPLLSRWYF PALAQLNGID FWFIAAAIFW PLWWFATRLS TFAYRQPRWV QLLVLSGVPT LAAGIWVEIN PSRLDQTNYK QGVLTAYDFS RTAPVIFDVV VWPLVPFGID EYDTTNQTKP PAFSLKEPQK LATPWDRPHW LGTNHNGVDL LTLLIWGARI SLSVGLVAVL IYMSIGIVLG ALAGYFRGWV DILISRLIEV VICFPTLFLV LTIVALLKPS LINIMIVIGL TGWTGVARLV RSEFLRLVNQ EFVLAGKSIG FSSTRLIFRH ILPNALAPVV VAATFGIAGA ILLESSLSFL GLGVRVPTPS WGTILSEGRT RLLQAPWQMT YPGFAIFITV TCYNLIGEAL RDAADPRLRG TR
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