| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1403 |
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| Symbol | |
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| ID | 9138098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 1785362 |
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| End bp | 1787962 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003629436 |
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| Protein GI | 296121658 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.254941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGGCC TGCTTGTCGG AACTCAAGGA TGTTTCATCA CTTCGTCTCC ACCTGTTGCG
AATCAGGGCG GGGGAGATGC AGCAGCCGAA AAACTCACTG CGGCAGCTCT CAAGATGGAG
CAGGCCGCTG ATCGACTCGC TGCCGCAGCC GATCGATTGT CGAAGCTGGA AGTGAGGGTG
GGTTCAGGGA CGGGCTCCGC GGCTTCCGAA GCAACGGCTT CACCAACGAC AGCAGAGGCC
AAGCCAGTAG AGACAGCCGC CTCGTCGACC GAAGCCAAAC TGATCCGCGA AGTTGATGAG
CTCTACGCCA AATACCCCGA TGTCCCCCGT GTCGAAATCC TGAAAGAACT CGATGGCATC
GAAATTCCTC GTGTCAAAGC CGGCAGCGGC AAAACACTAG AGTTGGGTGC AGGCATACCA
GTGGACGTCG GGAACCCGCA CGCGGCGAGC AAACCCAGCC AACCGGTCAA GGGTGATCAG
GTCATTGTGC GGTTCAATTC CGAGCCCAAA TCGTTGAACC CCGTCATCGA ACAGTCAGCG
GTCCAAACCT ACATGGGCCA ATATATTCAG GAAGCTCTGG CGCGGCAGGA CAACGAGACC
TTCGAGTTTG TGCCTCACCT CGCGACGAAA TGGATCATCG AAGATTCCGT CAAGCTCTCG
TCGGATTATC CCGGTAAGAA ATATCGCCTC GTCCTCGGTG ACGGCAGCCC ACTTCCTTCA
GCTGAAATCG AGTATCTGCC GCCCGCCAAA AAAGACCCCA AGGCCGAACC TGAGGTCATG
AAGATCGTCG TCAAAACGGT CAATGAGGAA GGTCAGCCGA TTGCCAAAGG CTGGGTTGGC
CTTTTCCCCA TCGGCAAAAT TCTGGGAGCG CCAACTACTG GCTATCACAA CTGGAGCAAT
GAACAAGGCG AACTCGTCAT CAGCGGGATC ATTCCCGGCA AGTACCGCGT CCTGACGGGG
AGCGAGATTT ATGGAAAAGT GAAGCCGCTA GCCGATGGAG CCATCGAAGT CACTCCGCTT
TCCGAAGAGA ACCCGCTCAA GCAGGCACTT CCACCCGGCC AGACATCGCT CGTTCTTAAA
GCCGATGAAT ACCAGGATAT TCAGCGCGAG ACGTGGATGA CGTTTTATCT CGATCCCCGA
GCCAAATGGT CTGATGGCAC TCCCTTTACG AGTACCGATC TCAAGTTTGC CTTTGCAGTC
TTGAACAACA ACACAGTCGA CTGTGATGCC GTTCGGACCT ATTACTCAGA CCTCACAGAT
CTGGATGCCC TTTCGCCGCT GGTCGTGCGC ATGCGATATC GGCAGCAGTA CTTTAAAGCG
TTCGAGTTTG GTGCCGGGAT TGGCCTCTAC ACGCCCCCGT TTGAGTTCTT CAAGAATCGA
CTGAAAACAC AGACCACCGA ACCTGCGATC ACAGGCTACG AGCTGACTCT CGATCGTCTC
ACCGAAGCGG AAGAAGATTC TCAGAAGAAA GTGAGCGCGC ACGGAAAGCG GTTCGGAAAA
TTCTTTAATC TCGACACGGC CTACAATCAG ACTCCTCTGG GAACTGGCCC TTACATGGTC
GAAAGCTGGA AGAAGACCGA TCGCGTCATT CTGAGCAGAA ATGACAGCTA CTGGCTGCCC
GAACGCAGTG GTTACCTTGA TAAGCTGATC TTCCGTTTTC TCCCCGATAA TACGACCGCG
CTGCAATCGT TGCGTGCCGG TGAAATCGAC TTCAATTACC GGATGGACCC CGAGCAGTTC
ACCAAGGATC TCGCTGGTCC GCCCGATTGG TTCAAAGACA AGTTCATCAA AGCCGATTGG
TACACCCCGA ACTACGGCTA CTACTGCTGG AATCTCAACC GGCCCTACTT CAAAGACCAG
CGCGTCCGCA TGGCTCTGGC TATGCTGTTC GAGAAAGAAG CGTTCCTGAA AAACAAGATG
TACAATCTGG GAACGATGGT CAGTGGCAGC CAGTATTACT TTGGTCCCGG CTATGACCAC
TCGGTCAAAT CGGTCGATTA CAGTCCTGAA ACGGCTCGCG ATCTCCTCGC GACCGCTGGG
TGGATCGATA CAAATCGGGA TGGCATTCTT GACCGAGACG GTGTGAAACT CAGCTTCGAA
GCTCTGATCC CTTTTGGAAA TCCAGTTATT GATGACCGTA CGGCACTCCT GCAGAAAACA
CTCAAGCAGG TTGGGGTCGA CATGCAAATT ACCCGCATCG AATGGGCAGC TTTTGTCGAA
CGTCTCAAAG CCAAGGATTT CGATCTCGTC ACACTTTCGT GGGCCATGCC TGTTGAGAGT
GATCCCTTCC AGCTCTGGCA CAGTTCGGGA GCTACGCCTG AATCGCGAGG CAGTAATGCC
GGCTCTTTTG CGAACAATCT GGCCGATGAA CTGATCGAGA AAATTCGAGT CACGCTTGAA
CCCGATAAGC GGGCGCTTCT GAACTATTCA CTCCATCGAC TGCTCGATGC CCAGCAGCCC
TATTTGTTCC TCTATTGCTC AAAAGACCTG GGGGCATATC ACAAACGCTT CCGGGGGGTG
AAGTGGTATC GTCTGCGGCC CGGTTTTGAT CTGGCTGAGT GGTATGTCCC CAAGGATGAG
CAGGTTCATA AGTCGGAATA A
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| Protein sequence | MVGLLVGTQG CFITSSPPVA NQGGGDAAAE KLTAAALKME QAADRLAAAA DRLSKLEVRV
GSGTGSAASE ATASPTTAEA KPVETAASST EAKLIREVDE LYAKYPDVPR VEILKELDGI
EIPRVKAGSG KTLELGAGIP VDVGNPHAAS KPSQPVKGDQ VIVRFNSEPK SLNPVIEQSA
VQTYMGQYIQ EALARQDNET FEFVPHLATK WIIEDSVKLS SDYPGKKYRL VLGDGSPLPS
AEIEYLPPAK KDPKAEPEVM KIVVKTVNEE GQPIAKGWVG LFPIGKILGA PTTGYHNWSN
EQGELVISGI IPGKYRVLTG SEIYGKVKPL ADGAIEVTPL SEENPLKQAL PPGQTSLVLK
ADEYQDIQRE TWMTFYLDPR AKWSDGTPFT STDLKFAFAV LNNNTVDCDA VRTYYSDLTD
LDALSPLVVR MRYRQQYFKA FEFGAGIGLY TPPFEFFKNR LKTQTTEPAI TGYELTLDRL
TEAEEDSQKK VSAHGKRFGK FFNLDTAYNQ TPLGTGPYMV ESWKKTDRVI LSRNDSYWLP
ERSGYLDKLI FRFLPDNTTA LQSLRAGEID FNYRMDPEQF TKDLAGPPDW FKDKFIKADW
YTPNYGYYCW NLNRPYFKDQ RVRMALAMLF EKEAFLKNKM YNLGTMVSGS QYYFGPGYDH
SVKSVDYSPE TARDLLATAG WIDTNRDGIL DRDGVKLSFE ALIPFGNPVI DDRTALLQKT
LKQVGVDMQI TRIEWAAFVE RLKAKDFDLV TLSWAMPVES DPFQLWHSSG ATPESRGSNA
GSFANNLADE LIEKIRVTLE PDKRALLNYS LHRLLDAQQP YLFLYCSKDL GAYHKRFRGV
KWYRLRPGFD LAEWYVPKDE QVHKSE
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