Gene Plim_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1356 
Symbol 
ID9138050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1728798 
End bp1729859 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content55% 
IMG OID 
ProductMalate/L-lactate dehydrogenase 
Protein accessionYP_003629389 
Protein GI296121611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.989483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAGTGA TTGCTATTGA AACCCTCTCC TCTTACGCAC AAAAACTCTT TCTGACAGCG 
GGAGTCTCCG AAGCGGATGC CAGTTGCATG GCCACCAGTC TCGTGGAGGC CAACCTGCGA
GGACACGATT CGCACGGTGT GATGCGGGTC GCTTCCTACA TCGAACAGAT CGAACAGGGC
CGCATCCTCC CGAAAAGTCA ACTCGACATC GTCAAAGAAT CAGCCTCTTC GATTGTGGCC
GACGGGAACT GGGGTCTGGG ACTCGTTCTC GCCCATCATC TCGTGGACAA AATGATTGCC
AAAGCCGCCT CATCGGCTGT CGTCATCGGC ACTTTGCGAC GTTCTTCACA TATTGGTCGT
CTGGGTGAAT ATGCCGAAAA GTTTGCGGCT CACGGCCTTG TTTCGATGGC ATTGGCCAAC
ACTCACGGTG CTGCCCAGCG CGTCGCACCG GTGGGAGGCA AGCGCCCTCG ATTAGGAACA
AATCCTATTT GCATTGGTGT GCCAGGAGGC GCCCAGGGCC CCTTCATTTT CGATATTGGG
ACCAGTGCGA CAGCAGAAGG CAAAGTCCGC GTGAAGAAAA TCGCTGGCGA GCCGGTTCCA
CCCGGCTGGA TTCTCGATCC TGAAGGAAAT CCCAGCACCA ATCCCAACGA CCTATACGGC
AATCCTCCAG GGACCATCCT GCCCTTAGGC GGAGACCAGG CTTACAAAGG CTTCGGTCTC
GCATTCATGA TCGAAATGCT ATGTGGTGGC ATGTCCGGAG GACAATGTGC CTATCCCAAT
CCACCGGCTC CCATTGGCAA CTGTGGCTGG TTCATGGCCA TCTCTCCCGA ATTCTTTGCC
GGGACAGATC ATCTGCTTCA GGAAGTACAG CAGTTGGAAC AGTATGTTCG CAGCGTTCCG
AAGATTGATG AATCCAAGGA AATTTACCTT CCTGGAGATC CTGAACGATC GACCCTCAAC
AGCCGGCAGG CCAAAGGTAT TCCCCTCGAT GAAGGGAACT GGAAGGCTCT TGTCGCACTG
GGTGATCGAC TCGGCGTCGC TGCACCAGCT CTTGCGTCCT GA
 
Protein sequence
MPVIAIETLS SYAQKLFLTA GVSEADASCM ATSLVEANLR GHDSHGVMRV ASYIEQIEQG 
RILPKSQLDI VKESASSIVA DGNWGLGLVL AHHLVDKMIA KAASSAVVIG TLRRSSHIGR
LGEYAEKFAA HGLVSMALAN THGAAQRVAP VGGKRPRLGT NPICIGVPGG AQGPFIFDIG
TSATAEGKVR VKKIAGEPVP PGWILDPEGN PSTNPNDLYG NPPGTILPLG GDQAYKGFGL
AFMIEMLCGG MSGGQCAYPN PPAPIGNCGW FMAISPEFFA GTDHLLQEVQ QLEQYVRSVP
KIDESKEIYL PGDPERSTLN SRQAKGIPLD EGNWKALVAL GDRLGVAAPA LAS