Gene Plim_1301 details

Gene Information

• Locus tag: Plim_1301
• ID: 9137995
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1661677
• End bp: 1662264
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 54%
• Product: nitroreductase
• Protein accession: YP_003629334
• Protein GI: 296121556

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGAGT CTTTATTGCC TCCATCTGAT GTGTCGAAGT CGATTCAGGA ACTCATGGCG 
ACTCGCCGGA CAATTGGTGC GTTTTTGCCT GAAGCCAACG GGCTTCAGGA TGCTCTGCTC 
GAAGCGGTTG AAGCCGCCCG CTGGGCTCCG AACCACCGGC GGACAGAACC ATGGCTGTTT 
GTCAATCTGG GGCCTGAGAC GATCGAAAAA GTTCTGACCT TGAACGATCA GATTCTCACA 
GCCAGTAAAG GGGCCGAATT TGCTGCCACG AAGCGAAAAC AGTGGGCTGA AATCCCCGGC 
TGGCTGGTGG TCGGTTGTAA AGTCTCGGAC AACCCGGAAA TTGCCGAAGA AGATTATGCA 
GCCTGTGCCT GTGCAATACA GAATCTCACG TTAAGTCTGT GGTCACGAGG CATTGCCAGC 
AAATGGTCCA CAGGCGACAT CACAAAGCGA GCGGACTTCG CCACGATTTG TGGTCTCAAT 
CCAGAAAACG ACCGCATCGT GGGCCTGATT TGGTACGGCT ATCCCGCCAA AGTTCCACCT 
GGCAGCCGTC AGCGTACTGC TGATCAGATT CTCACCAGAC TTCCTTGA 

 

Protein sequence

MTESLLPPSD VSKSIQELMA TRRTIGAFLP EANGLQDALL EAVEAARWAP NHRRTEPWLF 
VNLGPETIEK VLTLNDQILT ASKGAEFAAT KRKQWAEIPG WLVVGCKVSD NPEIAEEDYA 
ACACAIQNLT LSLWSRGIAS KWSTGDITKR ADFATICGLN PENDRIVGLI WYGYPAKVPP 
GSRQRTADQI LTRLP