Gene Plim_1157 details

Gene Information

• Locus tag: Plim_1157
• ID: 9137845
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1476138
• End bp: 1482311
• Gene Length: 6174 bp
• Protein Length: 2057 aa
• Translation table: 11
• GC content: 56%
• Product: alpha-2-macroglobulin domain protein
• Protein accession: YP_003629191
• Protein GI: 296121413

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTTG ATGCCATCGT TAAGCTGCTT TGGTCAGGAA AGCGCTGGGC CACTTTGTGT 
GTGCTCGTGG CCTGTATCAC CCTCATTGCC GACTTAACAC TGGGTTGGAG ATTCGTTATG 
GCCGAGAAGC AACCCGGCCC AGCCACAGTT TCACAAACCA AAGAACTCAT CAAACAAGGC 
AATTTTCTTA AAGCCCTGGA ACTCATTGAG CCTCAGCTTT CGAATCCACA GGCCGATCCC 
GCACAGATCA GCCTGTGGCT CCCTCAAATG ATCGATTGTC TGCAGCGCTT AGGTCGTATC 
GAGCGAGCCG ATGAGCTTCT GGAAAAGGCC GTCAGCACTC ATGCGAAAAG CTATCAGGTC 
CTGGCGGCTG CGGGAGAGAC TTACCAAAGC CTCCTCCCCA ATGGGCAGAT GATTGCGAAC 
GAGTTCATTC GCGGGAACGG CGATGGCCGC GGCAAAACCG TCTGGTCAGA TGACCGCGAC 
CGCGTGCGCG CGCTGCAACT GCTGAACCAG GCCTGGCAAC TGGCCCCCGA AAATCCGCCC 
AAAGTTCGCG TCGATATTCT CAAGCAAATG GTCAATGCCC TGACTGCCAA TCGCAGCGAT 
CAACAGGCCT GGCGATTGCA GACACTCACC AGTCTCGATC TCCTGCCCGA ATTTGAAGAA 
GTTCCCATCT GGTTTCGAGG TCGGGAATCG TCAGATGCTC CTGTCACAGC CGATGGCCAG 
CCACTTTATT ATTCCATCCC GGAAAGCTGG GCCGCAGCGA AGTCCGATGG CGAGCGTTAC 
CGCTGGTTGC TGGCCGAACA GAAAAAGATC CTCCCCAGTG AAGGCCCTCG CGTCGATCTC 
GAATTCGCAC AATTTGCTCA GTCGCAATTC GGCGTACAGA CTCTCAGCTC ACGCGGCTGG 
TTCCACCTCC CCGATCCCAC AGAAGAAGGC CAGACCGGTG CGATTCTTTC ACTCGAAACC 
TTAGCTCCCA ACGAAACCGT CGCACGCCTG GCCAACGGCA TTCGCCGTTT TCAGCTTCGC 
GAAGACTACG CCTTTCTCAA CACTTACCAG GCGCTGGCCG AGAGTAAAAA CACAGGCATT 
GCCCAGACAG CCCGCGAGTT ACTGGCCACT GCCTTTGAAA ATCGCAGGCA ATATCCTCAG 
GCCGCCGCCG AGTGGCGGGA ACTCCTCAAG CAGAATCCCA AAGCCACAGA GGCGAACAGA 
CATCTTGAGC AGATCGTCAA CAGTTGGCTC GCACTCGAAC CCGCCCGTTC GCAGATCTCA 
GGGACCAACG CTAAGTTGAG TGTGCGGTAT CGCAATGGCA AGAACATCTC TTTCGTTGCC 
GAGCCCATTC GTGTTGCTGA ACTCTTTCAG GAAGCGCAAC GCGTTCTCAA AACCAACCCG 
CGCGATGTCG ACTGGTCAGC GTTGAATCCT GACCAGATTG GCTACTCGAT TGTCACGCGC 
GATCAGAAAA AATTTGTGGG TCCTTCAGTT GCCCGATGGT CACAGGTTGT CGTCCCTCGC 
CCCGAGCATC GCGATAGCCT CGTCGAGGTT GATGTTCCCA AGCTCCCAGC CGGCGCCTAT 
CTGATCACTG TCACCATGGA AGGTGGCAAT CAGGATCAGA TCATTCTGTG GCTGAACGAT 
CTCGCACTCG TGCGCAAAGC TCAGGATGCC GGCCCGCTCT ACTTCGTTGC CAACGCTTCG 
ACAGGGACTC CCATTCCCAA TGCCTCCCTC GAATTGTTCG GCTGGAAACA GCAGTGGGAA 
GACAACGGTC GTCGCGTCAC CGTGCAGACG AAAACACTCA CTGGCAAATC CAACGCCCAG 
GGAATCGCCA CCTTTCCTCG CGAAGAAATG CAGGATTATC AGTGGTTTGT CAGTACCAAA 
ACACCTGCCG GGCAATTGGC CCAGCTTGGA TTGCAGGGCT ATTGGTATGG CCAGCGCAGC 
ACTCAACAGG AAGAACGCAA AAGGTCGTAC GTCGTGACCG ATCGACCGGT CTACCGTCCC 
TCGCAAACGG TACACCTCAA GGTCTGGCAG CAGTTAGCCA CTTATGCCGA AGTGCGGGCC 
GCAGTCACAC CCGAAGGTCA ACCACTCACG ATCCGTCTGC GCAAGCCTCA GGGTGAAGTT 
CTTCTCGAGA AGAAGCTGGC GATGGATCGA TTTGGTGGCG TGGAATTCGA TTACGAACTC 
CCCTCGGATG CCGCACTGGG CGAATATGCG GTCGAAGTCG AAAATTCGGA TTGGGGCCGC 
TTCCGCGTGG AAGAATACAA AAAGCCCGAA TTCGAAGTTC TCGTCGATGG CCCCGAAATT 
CCCACTCGTC TCGGGCAGAA GTTCACAGCC AAGATCACTG CCAAATACTA CTTTGGCTCA 
CCCGTTTCTC AGGGAACCGT CAGCTACAAA ATCGAGCGCC AGGCCTCGGA AGATCGCTTT 
TTCCCCATCA CTCCGTGGGA TTGGCTCTAC GGCCGCGGCG CCTGGTGGTT CGCGACCGAT 
GCCACCTGGT ACCCCGGTTT TGAAAGCTGG GGTTGCTTAG GGCCAATTCG CGGCTGGTGG 
CCACGCCAGG TCGAAGCGCC AGAACTCGTC GCCTCCGGCG AGGCGCCCCT CTCAGCCGAT 
GGCACCTATG AAATCGAGAT TGATACCGCC ATCGCCAAAG AACTTTTTGG CAAGACCGAC 
CACAAATACA CCATTCAGGC CGAAGTGACC GATGGCTCAC GGCGCATGGT CTCTGGCAGT 
GGTTCTGTCC TCGTCACCAG ACGACCTTTG CAGGTGACTG TCTGGGTTGA TCGTGGCTAT 
TTTCAAGCAG GCGATACCGT CCAGGCAACG GCCATGATCA CACAACCAGG AGGAGTTCCC 
TTTGCTGGCG AAGGTCAGTT TACGCTCTAT TCGGTTCGCT ATGACGAAGA TGGCACTCCC 
CAGGAAACGA AAGTGGAACA ATGGGCCTCA AAGCGAGGCG AGGATGGTCT GGCGAAGCAG 
TCGTTTGTCG CTGCGAAAGC CGGCCAGTAT CGACTGGCCT ACCTCGCACA AATTCCCAGC 
GCTACCGATA AAACCCAATT GGAAACTGTC GAAGGGGCCT ATCTTTTCAC TGTCCGTGGG 
GAAGAAGTCG TTCCCGGTGG CTTCCGCTTT AACGATCTCG AACTCACGAC CGATCGCAGA 
GAGTACGCAC CCGGCGAGAC CGTGCAGTTG ATGGTCTCCA CGAATCAGCC CAACTCTACT 
GTCCTCGTCT TTCTGCGCTC TTCGAATGGT GTGGGCGGAA AGGTGGAAGT CAAGCAGCTG 
GTGGGACAGA CCATGTTGAT CCCCATACCG CTCGATGCCG CCGATCGCCC CAACATTTTC 
GTCGAAGCGA TCACGGTCTC TGCAGGTGTT GTTCACTCGG CTGTGCGGGA AATTTTCGTC 
CCTCCTGCTG GAAAACTTCT CGACGTTTCG ATCACTCCCT CACAGGTCGA GTATCTGCCA 
GGAAGTGAAG CTCAGGCCAC GCTTGAAATC AAAGATAAAC TCGGTCAGCC ATTTGTGGGT 
CAACTCGCGC TCTCGGTCTA CGACCGCAGC ATTGATGCCA TTGCCGGCGG CCCACTCTCA 
GGCGACATTC GTGAATTCTT CTGGAGTTGG AAACGCAGTC ATACTCCCCA GAACGAAAAC 
AATCTCTCGC GCACGTCGTT CCCCGCCCGC ATGCCTCATC AAGTGGTTCT GCAGCCTATT 
GGTCTCTTTG GCAGCATGGA TGTTGATGAC AAAGTGTTGA GAAAACGTTT CGGCGGAGGT 
CTTGGTGTTC GCCGGGGTGG AATGGACAAT GCGGAGCGAT TCTCCGCCAT GGCAGGTGGT 
GCCCCCGGTG CACCTATGGC TGCGATGGCC GCTCCGATGT CCAAATCTCA AGTAATGGAA 
AGTGCTGATG CCGTCGCCCT GAACATGACA CAAATCGAGG CCGCCCCCGT CACTGTTCGA 
CAGGAGTTCG CCGATACTGC CTTCTGGAAT GGTTCGATCA TCACCGACGA ATCGGGCCGC 
GCTGTCGTCA AATTCAGAAT GCCCGAGAAC ATCACCGGTT GGAAACTCCG CACGTGGGCT 
ATGGGGCCAC AGGCTCAAGT CGGCGAAGCG ACTTCGCAGG TTGTGACTCG TAAGAACCTG 
ATTGTCCGTC TGCAGGCACC ACGATTCTTC GTCGAAAAAG ACGAAGTGGT GCTCTCTGCC 
AACGTTCGCA ACGAATTCGC TGAGGCTCTG GCCGCTCAGG TGAATATCGA GTTCGAGGGC 
GACACCCTCC AACTGCTCAC ACCTGCGCTT GCGGACGTCG TGATCGATGG TCAAGCCGAA 
GTCCGCGTCG ATTGGCGGGT CAAAGTCGTT CGCGAAGGGA CAGCCACCAT CCGCATGATT 
GCCCGCTCAA CTAAAGAATC CGATGCCACT CAGATGAAGT TCCCGGTCTA TGTGCATGGT 
GCCCCCAGAC AGGAACCATT TGCCGGGACG CTCAAGCCCG GCGTTGATTC ACTGGCTGTC 
GAATTCAAAT TACCAGCCGA GCGCCGGCCC GAAACCGCCA TTCTCGATGT TCGCTACTCG 
CCCACTCTGG CAGGTGCCAT TGTCGACGCT CTCCCTTATC TCGTCGAATT TCCTTATGGC 
TGTACTGAGC AGACACTCAA CCGCTTTCTG CCCACACTCG CCACGCAGCG ACTGCTCCTG 
TCGATGAATC TGTCACTTCA GGAGATCGCC GCCAAACGGA GCCAGCTCAA TCCTCAAGAG 
GCTGCCGGGC CGGATGAACG AGCGGTTCGC TGGAAACGCT TCAACCGCGA GCCGGTCTTC 
AACGAGGCCG AAGTGGCCAA AATGAGCCGG GAGGGGCTGG AGGCTCTGGT CGAGATGCAA 
CTCTCCGACG GTGGCTGGGG CTGGTTCAGC GGCTTTGGCG AACACTCCTG GCCACACACC 
ACGGCAGTTG TGGTGCATGG TCTGCTCCTC GCCAAAGAAA ACGGTGCTCC TGTCAACGAA 
GAATCATTAG CTCGTGGCAT TGCCTGGTTG CAGAATTATC AGGCAGGAGA ACTCCGCTGG 
TTGAAACTCC CCAAAGAAGC TCATAACCAT AAATCCAAAG CCGATGATAC CGATGCACTG 
GTCTTTTCAG TCCTGGGCGA AACCCGCCAG TTTTCAGCCG AAATGCGGGA GTTTCTCTAC 
CGCGATCGAG TCGATCTGTC GGTCTATTCG ATGAGTCTAT TCGCTCTGGC CCTGCATGCC 
GAAGGCCGAG CCGAACAACT CGCCATGCTG CAGGAAAACA TCGGCCAGTT CGTCGTTCAG 
GATGCTTCGA ACGAAACCGC ATTCCTCAAA CTTCCCGCTG GCAATCGCTG GTGGCTCTGG 
CATGGCAGCG ATATCGAAGC GATGGCCACG TACCTCAAGC TCCTCGTACG CACCAATCCC 
CAAAGCGAGG TCGCTCCCCG ACTGGTCAAG TACCTGCTCA ACAATCGCCG GCATGCCACC 
TACTGGAACA GCACTCGCGA TACGGCGCTG GTCATTGAAG CCTTCATCGA ATATCTCAAA 
GCGACAGGAG AACTCAATCC TCAGATGACA GTCGAAGTCT GGCTTGACGG CAAGCTGCGC 
CAGGAAGTCG CTCTCTCGAA AGAGAACCTG TTCACCGCCC AGACACGCCT GCTGGTCACT 
GGTGACGAAT TAACCACAGG GGCTCATCGC GTCGAATTCC GCCGCAAAGG GGCCGGGCCG 
GTCTACTTCA ATGTCGATGT CAGTTACTTC TCTCTGGAAG ATCCCATCCC AGCAGCAGGA 
TTAGAAGTCA AAGTCGATCG CAAGTTCTAT CGGCTCGATC CGATTGTGAA AGACGGCGTC 
CGCCCCACTC AAACCGGTGC GGCACAAAAT GTCGATGAGG CCGGCTTTAA GAAGACCCCG 
CTGGCCCGTC TCGATGAACT GAAAAGTGGC GACCTTCTCG AAATCGAATT GATCATCGAA 
ACCAAGAACG ATTACGAGTA CCTGCTCTTT GAAGATCTCA AAGCCGCAGG AAGTGAAGCG 
GTCGATCTCC GCAGCGGCTA TACAGGCAAT GAACTGGGGG CTTTTGTCGA ATTCCGCGAT 
GAACGCGTGG CGTTCTTTGT CCGATCGTTG CCACGCGGAC GGCATCAGGT CAGCTATCGT 
CTGAGAGCCG AAATCCCAGG GCAATTCAGT GCCTTACCCG CTCGCGGACA CGCCATGTAC 
GCCCCCGAAC TTCGCGGCAA CTCCGATGAG TTCAAACTGC GGATTGTCGA TTGA 

 

Protein sequence

MKLDAIVKLL WSGKRWATLC VLVACITLIA DLTLGWRFVM AEKQPGPATV SQTKELIKQG 
NFLKALELIE PQLSNPQADP AQISLWLPQM IDCLQRLGRI ERADELLEKA VSTHAKSYQV 
LAAAGETYQS LLPNGQMIAN EFIRGNGDGR GKTVWSDDRD RVRALQLLNQ AWQLAPENPP 
KVRVDILKQM VNALTANRSD QQAWRLQTLT SLDLLPEFEE VPIWFRGRES SDAPVTADGQ 
PLYYSIPESW AAAKSDGERY RWLLAEQKKI LPSEGPRVDL EFAQFAQSQF GVQTLSSRGW 
FHLPDPTEEG QTGAILSLET LAPNETVARL ANGIRRFQLR EDYAFLNTYQ ALAESKNTGI 
AQTARELLAT AFENRRQYPQ AAAEWRELLK QNPKATEANR HLEQIVNSWL ALEPARSQIS 
GTNAKLSVRY RNGKNISFVA EPIRVAELFQ EAQRVLKTNP RDVDWSALNP DQIGYSIVTR 
DQKKFVGPSV ARWSQVVVPR PEHRDSLVEV DVPKLPAGAY LITVTMEGGN QDQIILWLND 
LALVRKAQDA GPLYFVANAS TGTPIPNASL ELFGWKQQWE DNGRRVTVQT KTLTGKSNAQ 
GIATFPREEM QDYQWFVSTK TPAGQLAQLG LQGYWYGQRS TQQEERKRSY VVTDRPVYRP 
SQTVHLKVWQ QLATYAEVRA AVTPEGQPLT IRLRKPQGEV LLEKKLAMDR FGGVEFDYEL 
PSDAALGEYA VEVENSDWGR FRVEEYKKPE FEVLVDGPEI PTRLGQKFTA KITAKYYFGS 
PVSQGTVSYK IERQASEDRF FPITPWDWLY GRGAWWFATD ATWYPGFESW GCLGPIRGWW 
PRQVEAPELV ASGEAPLSAD GTYEIEIDTA IAKELFGKTD HKYTIQAEVT DGSRRMVSGS 
GSVLVTRRPL QVTVWVDRGY FQAGDTVQAT AMITQPGGVP FAGEGQFTLY SVRYDEDGTP 
QETKVEQWAS KRGEDGLAKQ SFVAAKAGQY RLAYLAQIPS ATDKTQLETV EGAYLFTVRG 
EEVVPGGFRF NDLELTTDRR EYAPGETVQL MVSTNQPNST VLVFLRSSNG VGGKVEVKQL 
VGQTMLIPIP LDAADRPNIF VEAITVSAGV VHSAVREIFV PPAGKLLDVS ITPSQVEYLP 
GSEAQATLEI KDKLGQPFVG QLALSVYDRS IDAIAGGPLS GDIREFFWSW KRSHTPQNEN 
NLSRTSFPAR MPHQVVLQPI GLFGSMDVDD KVLRKRFGGG LGVRRGGMDN AERFSAMAGG 
APGAPMAAMA APMSKSQVME SADAVALNMT QIEAAPVTVR QEFADTAFWN GSIITDESGR 
AVVKFRMPEN ITGWKLRTWA MGPQAQVGEA TSQVVTRKNL IVRLQAPRFF VEKDEVVLSA 
NVRNEFAEAL AAQVNIEFEG DTLQLLTPAL ADVVIDGQAE VRVDWRVKVV REGTATIRMI 
ARSTKESDAT QMKFPVYVHG APRQEPFAGT LKPGVDSLAV EFKLPAERRP ETAILDVRYS 
PTLAGAIVDA LPYLVEFPYG CTEQTLNRFL PTLATQRLLL SMNLSLQEIA AKRSQLNPQE 
AAGPDERAVR WKRFNREPVF NEAEVAKMSR EGLEALVEMQ LSDGGWGWFS GFGEHSWPHT 
TAVVVHGLLL AKENGAPVNE ESLARGIAWL QNYQAGELRW LKLPKEAHNH KSKADDTDAL 
VFSVLGETRQ FSAEMREFLY RDRVDLSVYS MSLFALALHA EGRAEQLAML QENIGQFVVQ 
DASNETAFLK LPAGNRWWLW HGSDIEAMAT YLKLLVRTNP QSEVAPRLVK YLLNNRRHAT 
YWNSTRDTAL VIEAFIEYLK ATGELNPQMT VEVWLDGKLR QEVALSKENL FTAQTRLLVT 
GDELTTGAHR VEFRRKGAGP VYFNVDVSYF SLEDPIPAAG LEVKVDRKFY RLDPIVKDGV 
RPTQTGAAQN VDEAGFKKTP LARLDELKSG DLLEIELIIE TKNDYEYLLF EDLKAAGSEA 
VDLRSGYTGN ELGAFVEFRD ERVAFFVRSL PRGRHQVSYR LRAEIPGQFS ALPARGHAMY 
APELRGNSDE FKLRIVD