| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1142 |
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| Symbol | |
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| ID | 9137829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 1451167 |
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| End bp | 1451946 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor, FliA/WhiG family |
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| Protein accession | YP_003629176 |
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| Protein GI | 296121398 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.560778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGACCA GGGTTATCGA AGACATTCAG GCCGTCTGGA ATGCCTATAA GCAGGACCAG
TCGAGCAAAG CACTGCGTAA TCGCCTCATG GAGAATTATC TCCCGCTGGT GCGATACAAC
GCAGAGCGAG TGTGGTCCAA GCTTCCGGAT GGCGTGGATA TCAACGACCT GATTTCCGCT
GGAGTCTTCG GACTCATGGA TGCTATTGAA GCATTCGATA TGGAGCGTGG AGTTAAGTTT
GAAACCTACT GTGTCCCGCG AATTCGTGGA GCCATGCTCG ACGAACTCCG CACCATGGAC
TGGGTTCCTC GACTTGTGCG CAGCAAAGCC AGCAAGCTGG AATCGGCCCG CAAGCAGGCC
GAAGCCGAAC TCGGCAGACC TCCGGCTGAT AATGAAGTCG CTGCCAAGAT GGGCGTCCCT
CTGGATGAGT ACGAAAAGCT CAAGAGCGAA GCCAGTGCTG TTAATCTCGT CAGCCTGAAC
AAGAAGTGGT ACGAGACCGA TAGTTATAAA GATGTTCGTG AAATCGACAT CATTGAAGAT
ACTAAAGGCG AAGACCCGAC TCTCAGCATC CAGAAGCGTG ACCTGATGAA ACTGGTCACC
AAAGGTCTCA ACCGCAACGA ACGCCTGATC ATCATTCTCT ACTACTACGA AGAGTTGACG
ATGAAGGAAA TTGGCAGCAC TTTAGGGCTG TCAGAATCTC GCGTGAGCCA GATGCATTCG
AGTATCGTCA ACCGACTCAA AGAACAGCTT GGCCGCCGCA GACCGGAATT TGCTCAGTAA
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| Protein sequence | MVTRVIEDIQ AVWNAYKQDQ SSKALRNRLM ENYLPLVRYN AERVWSKLPD GVDINDLISA
GVFGLMDAIE AFDMERGVKF ETYCVPRIRG AMLDELRTMD WVPRLVRSKA SKLESARKQA
EAELGRPPAD NEVAAKMGVP LDEYEKLKSE ASAVNLVSLN KKWYETDSYK DVREIDIIED
TKGEDPTLSI QKRDLMKLVT KGLNRNERLI IILYYYEELT MKEIGSTLGL SESRVSQMHS
SIVNRLKEQL GRRRPEFAQ
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