| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0900 |
|---|
| Symbol | |
|---|
| ID | 9137585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 1150958 |
|---|
| End bp | 1152103 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003628943 |
|---|
| Protein GI | 296121165 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATTG CACTCGTCCG TCGCGTTTGC TCGCTGAAAA AAGCAGGGGC CGAAAGGTAC
TGCATCAATC TCATGCGGCA ACTCAGGGCC AAAGGGCACG AAGTCACCAT CGTGGGAGAG
TCGATGGATG ATTCCCTGAA GGCTGAAGCT GCTCACTTAA AGGTGCCTGT TTCGAAGTGG
ACTTCCTGGA CCAAAAACCT GAGCCTCGCC CGCAATGCAA GGAAGGTCTT TGCCAATCAG
GGCTTCGATA TTGTGCATGG GCTTTCTCGT GTCTATGGCC TCGACACTTA TCGGCTCACT
GACCCGCTGC AGACGCATTG GCTTAAAGTC TTTTATCGGG GCAAGATGCA GCAGTTCCTG
CAAAGGTTGA ATCCCAGACA TCGCACCATT TTAAGAATAG AGAAGCAGCT CTTCGGGCCA
GATGGCCCCA GACGCATCAT CGTCCAGTCA AAACTCGATG AGAGGCTGCT CAAGGAGTAT
TTTGACGTCG ATCCCAAGCG TCTTTGCCGT GTCACCAATG GGGTCGATAC AAAGAACTTT
CATCCCGATT ATCAGCATGA ACGGCTGGCA GTGCGGGCTG AGTGGAAGAT TCCTGATGAA
GCGCCGCTGC TGACGTTTGC TTCGATGGAT TTCCGCCGCA AAGGTCTTTC GCGATTGCTC
CAGGCCATGT CGATTGCCCG AACGAGCGGA ATGTGGCTGA TGGTCATTGG TGACGGGGAT
ATTGCCCGAT TCAAGGCCCT GGCGGCCTCT ATGAATCTGG CTGATCGACT GGTGTTTACG
GGTCGCCAGC AGGCCATTGC CAGGCTCTAT GCTGCCAGCG ACCTGTTTGT CCTGCCCACA
ATTTATGAAC CCTTTCCGAA TGTGAATCTT GAAGCCATGG CGTGTGGCAT TCCTGTGATC
ACGACGGCAA CGGCTGGCGG GGCGGATGCG ATTGAACCAG CGATCAATGG CTATGTCATT
GCCTCACCAG ACGATGTCGA GTGTCTGGCT GATCGTATTG ATTTTCACTT CGGTCGTGGA
GAGACACAGT TACGACTGAT GTCGGCCGCC GCTCGTTCGA CAGCCCTGCG TTACACGCCC
GAAGCGAACG CTGAACAGAC ATTGGCCGTC TTTCAAGAGG TGCTCAGTGA AAAAGCGGCC
GCTTGA
|
|---|
| Protein sequence | MRIALVRRVC SLKKAGAERY CINLMRQLRA KGHEVTIVGE SMDDSLKAEA AHLKVPVSKW
TSWTKNLSLA RNARKVFANQ GFDIVHGLSR VYGLDTYRLT DPLQTHWLKV FYRGKMQQFL
QRLNPRHRTI LRIEKQLFGP DGPRRIIVQS KLDERLLKEY FDVDPKRLCR VTNGVDTKNF
HPDYQHERLA VRAEWKIPDE APLLTFASMD FRRKGLSRLL QAMSIARTSG MWLMVIGDGD
IARFKALAAS MNLADRLVFT GRQQAIARLY AASDLFVLPT IYEPFPNVNL EAMACGIPVI
TTATAGGADA IEPAINGYVI ASPDDVECLA DRIDFHFGRG ETQLRLMSAA ARSTALRYTP
EANAEQTLAV FQEVLSEKAA A
|
|---|
| |