Gene Plim_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0813 
Symbol 
ID9137497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1050192 
End bp1050986 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content55% 
IMG OID 
Productpeptidase C26 
Protein accessionYP_003628857 
Protein GI296121079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.540694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGCA AAGTTGCTGA ACCTATTTCC AAGCCCGTTG TTCTGCTCAA TGGGGATTTT 
CGCCCCAAGA AGAAAGACGG CCCGGCACTG AGCTGGTTTA ACACCGGCTA TTACGACTCA
GTCACCGCCG CTGGTGCTTT ACCGATTCTG ACCCCTCCAC TGGAAGATAC GGACGATTTG
AAGCAGATTC TCGACTCGGT GGATGGCGTG GTTCTGGCCG GTTGTGGTCA CGATCTTGAC
CCCGTTCGCC TGGGTTTGGA ACCGCACCCA CACACTCGCC CCATGCCACA ACGCCGGGAA
GATTTTGATC GCTTGCTCTG CAAGATGGCT GTCGAAATGA AGCTGCCAAT CCTGGCGATC
GGCTCGGGCA TGCAGACGCT GAATATTGTG CTGGGTGGCT CGATCTTCCA GCACGTTCCG
GAAGAAGTTC CCCGTGCTCT GCACCACCGC GATTCGGTCG AAAAATGTAA TCGCCATATT
ATTGAGATTA CCGAAGGAAC CCGTGTCTGG GATGTTTACG GCCCTGGTGA AATCCGCGTC
AACAGCGATC ATCACATGGC TGTCAATCAG TTAGCTCAAG GCTTCCGTGC CTCAGCCTGC
TCACCAGACG GTGTGATTGA AGCTTATGAA TCAACTGACC CGGACTGGTT CTGCATTGGT
GTGCAATGGC ATCCGGAAGA TGACACCGCC AGTGCTCTCG ACATGCAGTT GTTCCAGGAA
TTCGTGGGTG CTTGCCGTAT GGGCAACATG CCAGCTGTCA TTCCAATGAC AGGTCGCCAG
AAGGTGGCTG CCTGA
 
Protein sequence
MSRKVAEPIS KPVVLLNGDF RPKKKDGPAL SWFNTGYYDS VTAAGALPIL TPPLEDTDDL 
KQILDSVDGV VLAGCGHDLD PVRLGLEPHP HTRPMPQRRE DFDRLLCKMA VEMKLPILAI
GSGMQTLNIV LGGSIFQHVP EEVPRALHHR DSVEKCNRHI IEITEGTRVW DVYGPGEIRV
NSDHHMAVNQ LAQGFRASAC SPDGVIEAYE STDPDWFCIG VQWHPEDDTA SALDMQLFQE
FVGACRMGNM PAVIPMTGRQ KVAA