| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0777 |
|---|
| Symbol | |
|---|
| ID | 9137460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 1009768 |
|---|
| End bp | 1010700 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003628821 |
|---|
| Protein GI | 296121043 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGCC CGACTATGAA TCGCTGGTTC GCCCTGTTGG CGATTCTTTC ATTTTCGATA
CAGAACATCT CGGCTGCTGA GCATCCGACG CAGACGGGGA CGCCACGCAG TTACATCGCG
GCTGATTATT CCAAAAAGAT TCTCGTCCAT GTAGGGGCAG ATAACTCAGA TGTCTGGAAG
CAGACAATTC GCGATGTGCA TGATCTCCAG ATTCTGCCCC ATGGCCATCT CCTCACACAA
ACGAACTTCC AGACGATCGT CGAGTTGAAT GACAAAGGCG AGATCGTCTG GAGTTACGAT
GCCAAATCGT CACCAGGGAA TGCGGATCGC AAAGTGGAAA TCCATGCGTT TCAAAGACTG
GCGGATGGCT CGACGATGAT AGTCGAAAGT GGGCCCGCCC GGATTCTCGA GGTAAACGCC
GAAGGAAAAG TTCTCAGGGA AATTCCGCTG GTGGTGAAGA ATCGGGATCC GCATCGGGAC
AGCCGACTGG CTCGCAAGCT GGAAAATGGC CATTACCTCG TTTGCCATGA GAAAGACCAG
ACTGTGCGGG AGTACGACGA GAAGGGCCAG GTGGTCTGGG ACTATGTAAC GGGGACAGCT
CTTTATTCTG CCGAACGATT ACCCAATGGA AACACGCTGA TTGGTACGGG GAATGGTCAC
AGCGTCATCG AAGTCACTCC CCAGAAAGAG GTGGTCTGGT CAGTCACTGA GAACGAGCTT
CCAGGAATCA AGCTGGGTTG GATCACCATG GTGGAACGAT TACCCGATGG CAACACCCTG
ATTGTCAATT GTCATGGTGG AGACAATCAG CCCCATGCAT TGATTGTGAC ACCTCAGAAG
CAGGTTGTCT GGACACTGAA GGACCATGTC CGCTTTGGAA ATAATCTGCC GGTTTTGAAA
CTCGTGGCCC AGGGATCGGG CACAACGCGT TAA
|
|---|
| Protein sequence | MNCPTMNRWF ALLAILSFSI QNISAAEHPT QTGTPRSYIA ADYSKKILVH VGADNSDVWK
QTIRDVHDLQ ILPHGHLLTQ TNFQTIVELN DKGEIVWSYD AKSSPGNADR KVEIHAFQRL
ADGSTMIVES GPARILEVNA EGKVLREIPL VVKNRDPHRD SRLARKLENG HYLVCHEKDQ
TVREYDEKGQ VVWDYVTGTA LYSAERLPNG NTLIGTGNGH SVIEVTPQKE VVWSVTENEL
PGIKLGWITM VERLPDGNTL IVNCHGGDNQ PHALIVTPQK QVVWTLKDHV RFGNNLPVLK
LVAQGSGTTR
|
|---|
| |