Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0775 |
Symbol | |
ID | 9137458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1005414 |
End bp | 1008065 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | protein of unknown function DUF1549 |
Protein accession | YP_003628819 |
Protein GI | 296121041 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.68888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTTTG TAAAAAATCG CGATGATTTT CGATTACCAC GCCAAGTGAA GAGATCTTCC CGATGGGGAA CGTCTTTGCT CGCAGCGAGC ATTTTGTCAG CGGCTGCATG GCTCATACAG GGACTGGTTT CCGGGGATCA TGCGGTTGCC GGTAAGGCAC TCGTTGCCGA AGAAAATCGG CAGGCTCCTG ATGATCCAGC TCCTGGTGAC TCATCGCCGG GTTTCAGTCC CGAAGATCTG GCGTTTTATC GAGAGAAGAT CGAACCGATT TTCGTCAAGA ACTGCAACGA ATGTCACGGA ACTGGCTCGA AGTTTCGTGG TGGGTTTTCG CTGGCGGCTC GTGAACATCT CTTGAAGGGG GGCGAAAGTG GGCCAGGTGT CTTGCTCGAT AAACCTGACG AAAGCATGCT GATTGATGTC ATCAATTATC GCACCTACGA AATGCCTCCA TCCGGGAAGC TTCCCGCCGA TCAGATTGCT TCGATTACGG AATGGGTCAA GCGGGGTGCC CCGATGCCGC CACCTGCTGT CCCTGTCGCG ATGCCAGTGC ATGAAGGGCC ACCTCAGGTT AATGAGACGA CGAAAGCTCA CTGGGCCTTC CGGCCGGTCA CAGATCCTCG GCCTCCCGTG AGCCAATGGG ATCGATTGGC AAAGAACGAC ATCGACCGCT TCCTGTTTGC CAAAATGGAA GCTGCTGGTC TGGAACCTGT CGGGCCTGCT GAAAAGCGGA CGCTCATTCG TCGGCTCTAT TACGACGTGA TTGGTTTACC TCCTTCGCCA GCACAGGTGG AAGCCTTCGT GCAGGATGCC TCACCCGAAG CGATTTCGAA GGTGATCGAC GATCTTCTCG AATCACCACA TTATGGTGAA AAATGGGGCC GCTTCTGGCT GGATCTGGTG CGCTATGCCG AGACCAACAG TTTCGAGCGC GACAACCCAA AACCAAACGC CTGGAAGTAT CGCGATTATG TGATTAACTC CTTCAATCGC GATAAACCAT ATGACCAGTT TTTGATTGAG CAACTGGCGG GGGATGAACT TCCACAGGTG ACACGTGATT CGGTCATTGC CACGGGGTAT TACCGTCTCA ATGCCTGGGA TGATGAGCCC GCCGACCAGA GGCAGGCGTT CTACGATGAG ATGGACGACA TTGTCTCGAC AACCGGTCAG GTCATGCTGG GAATGACAAT TGGTTGTGCC CGCTGTCATG ATCACAAACT CGACCCGATG CCTCAGAAGG ATTACTACGG GTTTCTGGCA TTCATGGCGG ATCTGCAATC GTATGCCGGA CGTGGCGATC AGATGAATTC CCGCTGGAGC CAGACCGATA TCAGCAGCCC GGAAGTCATT CAGGCGCATG CCGAGCGCGA TGCCGCTGTT CAGAAACTGG AAGAGCAGAT GCGTCAGATC GAGCAGGGTG CGATTCTGAA GATGAAAGGT GAAGACCAGC GCAAGACCGA AGGTGCCGAG CGAAAAAAGG TCCTGCGTGA AAAGCTGAAG GATTTTCTAT CAAAAGAAGA ATTTGATCAT TATCAGGGCT TAAAAAATCA GCTGGAAGAG CTTCGTAAGC GGGCTTTACC ACCGCGCGAA ATGGTGCTCT CCGTGAATAA CTGTCAGATG CCACCGCGAG TGACGCCCTT GTTGATTCGC GGTAACCCCG CGACTCCCGG TGAACCGGTC GAACCGCGGT TTCTTTCTGT GCTGACTGAC GATGCGCCAC AACTGCCAAC TCTGACTCCC GGTCAAAAGA CGGCAGGTCG GCGACTGGTG CTGGCGAACT GGATTGCCTC GAAAGAAAAT CCGCTGACAG CCCGGGTCAT GGTGAATCGC ATCTGGCAAA TGCACTTTGG TCGTGGACTG GTGAAGTCTT CCAGTAATTT TGGACTGAAG GGGGATCTTC CGACTCATCC CGAACTTCTT GACAGGTTGA CCACGCGGTT TATTGAAGGT GGCTTTCGGA TTAAGCCGCT ACATCGGCTG ATTCTCAATT CGTATGCCTG GCAGATGTCA TCCCGGCCCA CGGCGGCCCA GCTCAATGCC GATCCTCAGA ACGATCTTTA TTCGCACTTT GAGATGCGCA GGCTGACGGC CGAAGAGACC CGGGATGGAC TGCTGGCGGT CAGTGGCGAA CTCAATCTGG CGGTGGGTGG CCCGAGTGTC TACACCGCCA TGCCCAAAGA AGTCCTGGCT GGGCAATCCG TTCCGGGTCA AGGCTGGGGG CAATCCTCAC CCGAGGAGCA GAATCGCCGA AGTGTTTACA TTCATGTGAA GCGATCACTG CTGGTTCCCA CGTTGTCGAG CCTCGATTTC CCGGATCCTG ATGGGACATG CCCTATTCGG TTTGCGACGA CACAGCCAAC ACAAGCCTTA ACGAGCCTCA ACAGTGCCTT CTATAACCAG CAGGCCAAGG AGTTCGCCGA GAGAGTGCGG GCAGATCTGC AGATCAACGA ATTAAATGAT GAATCGCTGC GCCAATGTGT CGCACAGGCG TTAACGCTGA CCACCAATCG CCCACCGACG ACTGCGGAAG TCGAGCGCGG TTTCGGCTTG ATTCAGTCGC TGCGGGATCG TGGTCAGGTC AGTGCCGACT TGGCTCTGGA ACGTTTCTGC CTCGTGGCCA TCAACCTGAA TGAGTTTCTG TATCTCGACT GA
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Protein sequence | MLFVKNRDDF RLPRQVKRSS RWGTSLLAAS ILSAAAWLIQ GLVSGDHAVA GKALVAEENR QAPDDPAPGD SSPGFSPEDL AFYREKIEPI FVKNCNECHG TGSKFRGGFS LAAREHLLKG GESGPGVLLD KPDESMLIDV INYRTYEMPP SGKLPADQIA SITEWVKRGA PMPPPAVPVA MPVHEGPPQV NETTKAHWAF RPVTDPRPPV SQWDRLAKND IDRFLFAKME AAGLEPVGPA EKRTLIRRLY YDVIGLPPSP AQVEAFVQDA SPEAISKVID DLLESPHYGE KWGRFWLDLV RYAETNSFER DNPKPNAWKY RDYVINSFNR DKPYDQFLIE QLAGDELPQV TRDSVIATGY YRLNAWDDEP ADQRQAFYDE MDDIVSTTGQ VMLGMTIGCA RCHDHKLDPM PQKDYYGFLA FMADLQSYAG RGDQMNSRWS QTDISSPEVI QAHAERDAAV QKLEEQMRQI EQGAILKMKG EDQRKTEGAE RKKVLREKLK DFLSKEEFDH YQGLKNQLEE LRKRALPPRE MVLSVNNCQM PPRVTPLLIR GNPATPGEPV EPRFLSVLTD DAPQLPTLTP GQKTAGRRLV LANWIASKEN PLTARVMVNR IWQMHFGRGL VKSSSNFGLK GDLPTHPELL DRLTTRFIEG GFRIKPLHRL ILNSYAWQMS SRPTAAQLNA DPQNDLYSHF EMRRLTAEET RDGLLAVSGE LNLAVGGPSV YTAMPKEVLA GQSVPGQGWG QSSPEEQNRR SVYIHVKRSL LVPTLSSLDF PDPDGTCPIR FATTQPTQAL TSLNSAFYNQ QAKEFAERVR ADLQINELND ESLRQCVAQA LTLTTNRPPT TAEVERGFGL IQSLRDRGQV SADLALERFC LVAINLNEFL YLD
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