Gene Plim_0775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0775 
Symbol 
ID9137458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1005414 
End bp1008065 
Gene Length2652 bp 
Protein Length883 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1549 
Protein accessionYP_003628819 
Protein GI296121041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.68888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTG TAAAAAATCG CGATGATTTT CGATTACCAC GCCAAGTGAA GAGATCTTCC 
CGATGGGGAA CGTCTTTGCT CGCAGCGAGC ATTTTGTCAG CGGCTGCATG GCTCATACAG
GGACTGGTTT CCGGGGATCA TGCGGTTGCC GGTAAGGCAC TCGTTGCCGA AGAAAATCGG
CAGGCTCCTG ATGATCCAGC TCCTGGTGAC TCATCGCCGG GTTTCAGTCC CGAAGATCTG
GCGTTTTATC GAGAGAAGAT CGAACCGATT TTCGTCAAGA ACTGCAACGA ATGTCACGGA
ACTGGCTCGA AGTTTCGTGG TGGGTTTTCG CTGGCGGCTC GTGAACATCT CTTGAAGGGG
GGCGAAAGTG GGCCAGGTGT CTTGCTCGAT AAACCTGACG AAAGCATGCT GATTGATGTC
ATCAATTATC GCACCTACGA AATGCCTCCA TCCGGGAAGC TTCCCGCCGA TCAGATTGCT
TCGATTACGG AATGGGTCAA GCGGGGTGCC CCGATGCCGC CACCTGCTGT CCCTGTCGCG
ATGCCAGTGC ATGAAGGGCC ACCTCAGGTT AATGAGACGA CGAAAGCTCA CTGGGCCTTC
CGGCCGGTCA CAGATCCTCG GCCTCCCGTG AGCCAATGGG ATCGATTGGC AAAGAACGAC
ATCGACCGCT TCCTGTTTGC CAAAATGGAA GCTGCTGGTC TGGAACCTGT CGGGCCTGCT
GAAAAGCGGA CGCTCATTCG TCGGCTCTAT TACGACGTGA TTGGTTTACC TCCTTCGCCA
GCACAGGTGG AAGCCTTCGT GCAGGATGCC TCACCCGAAG CGATTTCGAA GGTGATCGAC
GATCTTCTCG AATCACCACA TTATGGTGAA AAATGGGGCC GCTTCTGGCT GGATCTGGTG
CGCTATGCCG AGACCAACAG TTTCGAGCGC GACAACCCAA AACCAAACGC CTGGAAGTAT
CGCGATTATG TGATTAACTC CTTCAATCGC GATAAACCAT ATGACCAGTT TTTGATTGAG
CAACTGGCGG GGGATGAACT TCCACAGGTG ACACGTGATT CGGTCATTGC CACGGGGTAT
TACCGTCTCA ATGCCTGGGA TGATGAGCCC GCCGACCAGA GGCAGGCGTT CTACGATGAG
ATGGACGACA TTGTCTCGAC AACCGGTCAG GTCATGCTGG GAATGACAAT TGGTTGTGCC
CGCTGTCATG ATCACAAACT CGACCCGATG CCTCAGAAGG ATTACTACGG GTTTCTGGCA
TTCATGGCGG ATCTGCAATC GTATGCCGGA CGTGGCGATC AGATGAATTC CCGCTGGAGC
CAGACCGATA TCAGCAGCCC GGAAGTCATT CAGGCGCATG CCGAGCGCGA TGCCGCTGTT
CAGAAACTGG AAGAGCAGAT GCGTCAGATC GAGCAGGGTG CGATTCTGAA GATGAAAGGT
GAAGACCAGC GCAAGACCGA AGGTGCCGAG CGAAAAAAGG TCCTGCGTGA AAAGCTGAAG
GATTTTCTAT CAAAAGAAGA ATTTGATCAT TATCAGGGCT TAAAAAATCA GCTGGAAGAG
CTTCGTAAGC GGGCTTTACC ACCGCGCGAA ATGGTGCTCT CCGTGAATAA CTGTCAGATG
CCACCGCGAG TGACGCCCTT GTTGATTCGC GGTAACCCCG CGACTCCCGG TGAACCGGTC
GAACCGCGGT TTCTTTCTGT GCTGACTGAC GATGCGCCAC AACTGCCAAC TCTGACTCCC
GGTCAAAAGA CGGCAGGTCG GCGACTGGTG CTGGCGAACT GGATTGCCTC GAAAGAAAAT
CCGCTGACAG CCCGGGTCAT GGTGAATCGC ATCTGGCAAA TGCACTTTGG TCGTGGACTG
GTGAAGTCTT CCAGTAATTT TGGACTGAAG GGGGATCTTC CGACTCATCC CGAACTTCTT
GACAGGTTGA CCACGCGGTT TATTGAAGGT GGCTTTCGGA TTAAGCCGCT ACATCGGCTG
ATTCTCAATT CGTATGCCTG GCAGATGTCA TCCCGGCCCA CGGCGGCCCA GCTCAATGCC
GATCCTCAGA ACGATCTTTA TTCGCACTTT GAGATGCGCA GGCTGACGGC CGAAGAGACC
CGGGATGGAC TGCTGGCGGT CAGTGGCGAA CTCAATCTGG CGGTGGGTGG CCCGAGTGTC
TACACCGCCA TGCCCAAAGA AGTCCTGGCT GGGCAATCCG TTCCGGGTCA AGGCTGGGGG
CAATCCTCAC CCGAGGAGCA GAATCGCCGA AGTGTTTACA TTCATGTGAA GCGATCACTG
CTGGTTCCCA CGTTGTCGAG CCTCGATTTC CCGGATCCTG ATGGGACATG CCCTATTCGG
TTTGCGACGA CACAGCCAAC ACAAGCCTTA ACGAGCCTCA ACAGTGCCTT CTATAACCAG
CAGGCCAAGG AGTTCGCCGA GAGAGTGCGG GCAGATCTGC AGATCAACGA ATTAAATGAT
GAATCGCTGC GCCAATGTGT CGCACAGGCG TTAACGCTGA CCACCAATCG CCCACCGACG
ACTGCGGAAG TCGAGCGCGG TTTCGGCTTG ATTCAGTCGC TGCGGGATCG TGGTCAGGTC
AGTGCCGACT TGGCTCTGGA ACGTTTCTGC CTCGTGGCCA TCAACCTGAA TGAGTTTCTG
TATCTCGACT GA
 
Protein sequence
MLFVKNRDDF RLPRQVKRSS RWGTSLLAAS ILSAAAWLIQ GLVSGDHAVA GKALVAEENR 
QAPDDPAPGD SSPGFSPEDL AFYREKIEPI FVKNCNECHG TGSKFRGGFS LAAREHLLKG
GESGPGVLLD KPDESMLIDV INYRTYEMPP SGKLPADQIA SITEWVKRGA PMPPPAVPVA
MPVHEGPPQV NETTKAHWAF RPVTDPRPPV SQWDRLAKND IDRFLFAKME AAGLEPVGPA
EKRTLIRRLY YDVIGLPPSP AQVEAFVQDA SPEAISKVID DLLESPHYGE KWGRFWLDLV
RYAETNSFER DNPKPNAWKY RDYVINSFNR DKPYDQFLIE QLAGDELPQV TRDSVIATGY
YRLNAWDDEP ADQRQAFYDE MDDIVSTTGQ VMLGMTIGCA RCHDHKLDPM PQKDYYGFLA
FMADLQSYAG RGDQMNSRWS QTDISSPEVI QAHAERDAAV QKLEEQMRQI EQGAILKMKG
EDQRKTEGAE RKKVLREKLK DFLSKEEFDH YQGLKNQLEE LRKRALPPRE MVLSVNNCQM
PPRVTPLLIR GNPATPGEPV EPRFLSVLTD DAPQLPTLTP GQKTAGRRLV LANWIASKEN
PLTARVMVNR IWQMHFGRGL VKSSSNFGLK GDLPTHPELL DRLTTRFIEG GFRIKPLHRL
ILNSYAWQMS SRPTAAQLNA DPQNDLYSHF EMRRLTAEET RDGLLAVSGE LNLAVGGPSV
YTAMPKEVLA GQSVPGQGWG QSSPEEQNRR SVYIHVKRSL LVPTLSSLDF PDPDGTCPIR
FATTQPTQAL TSLNSAFYNQ QAKEFAERVR ADLQINELND ESLRQCVAQA LTLTTNRPPT
TAEVERGFGL IQSLRDRGQV SADLALERFC LVAINLNEFL YLD