| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0685 |
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| Symbol | |
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| ID | 9137366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 901190 |
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| End bp | 904045 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003628731 |
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| Protein GI | 296120953 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.142322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCCG GTTTCTGGAA ATTTGCCGCC CTTTCGGTCG TGGTTGGGGT CTGTTCACTC
GTTGTCGTGA ATGTTTACGG CCAACTCAAC CAGCTTAATC AGTTGAAGCA GCCTCTGGTG
CATGCGGGTG AAATCTCCGC TGAGCAAGGC GCCGAAACCT TCCCGGAACT TGATCTGGCT
GTCGATGCGT CGCTGCCTCC TGTCCATGAG GCCCATGTTT CGACGAATTC GACCAAGGTA
GTCCCGGGTG AGACGGCAAA AGGTCCATCT TCAAGTCGTG GACTCGATTT TCGACTGGCG
GCTTATCAGG CCGGTGGGGA ATTCCCCGAA GCTGACCCCA CGGACGATGA GAAGCAAAGT
CCTGTCGTGC GCAGTCAATC AGCCAACGAA CCTGTATCGG GCCCTGCACT GGTATTGCCT
CCACCGACCG TCGCCGAAAA AGACTCAGCG GCAGCCATGC CCACACCTCC TGTCCTCCCC
GATCTGGATG CTCAACCACT GACAAGAACC TCAGGTTCGG CACGCACTGC ACAGATCGAA
CCCACAAAAG AAGCTTCCGG GGTCGCACCT CGTTTATTGG AGATTCCTGA TGCCCAGCCG
ATTCCGATCG GTCAACCGAC TGTTGGTGAG AAGACCCCAG CCGGAAGCAG GATTCAACAA
ACCAGCGGCA TCCAGAATGG TGAGGCGGAT CCCTTTGCTG ATGCATTCCC AGCGGACTTA
CCTCCATTAA AAAACAGTGC TCCAGCCAGT AGTGGACGAG AACCTGCGGG TGCTCAACCG
GGTGACAATC AGCAGCCCGG TGACATGCAG CCTTATCGCC GACCATCAAT GGCCCCCTCG
GCACCACCGG CGGTGATCCC TGAGGCAGAT CCCTTTGGGC TGGATACTCC TGCAACTCCT
CCCGCTGGCA ATAATAGCCG AGATCGTCTG CCATCGCGGA ATCCATCGAA TCGTGAATTG
CCCACCGATT CCGGTCTGCC AGCCAATGGT TCTGGTCGCA CAACTCCTCC AACCAGTTTG
CCTGTCGATC TCGATGTTGA ATTGGGTTTG CCTTCTCAGC TTCCGCCTGC AGGTTCCACG
AATGCTCCGG CCACTGGTCG AAATCGGAAT GAGCCCGATC GATTACGCCT GGTTGAACCT
GCGATTGGCC CTGATCGTGA TTTTCCCGGC GATGAAGTTC CTCGTACCGT TTTGCCTCCG
CGCAATTCGG GATCACGAGA TCTGGAAAAC TCATCGCGAA CTCTTCCGGC TGATAATGAT
CCCTTTGGTT CTGAGCCCGT GCGGGGACGG TTGCCGCAAG ATCCTCGCGG ATCAATTAGA
GATGATTTCC CGCAACGACG TCCCGTGAAC GAAGTGGTTG AGCCACCATT CGATTCCTCA
AACCGCCCGG CACGTCCAGC CGTGCTCCCG GAACCTGGAG CAGCGGCCGA ACCCACTGCG
CGGGCTGTTG AACAACCGCG GGTTGTCATT GAGAAGCAGG CTCCCGCCAG TGCCGTACTG
GGCCAGTCGC TGATTTATTC GGTGGTGGTA AAAAATGAAG GAACTGTGGC TGCCCGGCAG
GTGATTGTCG AAGATCGAAT TCCTAAAGGA ACACAGCTGA CGGGAACTGC TCCTCAAGCC
GAGATCAGCG ACAAGCGTTT GATCTGGAAG CTGGGGACTT TGACGCCCGG TGAAACCCGC
ACCATTCAAG TGCGAGTGAC CCCGGTGGAA GAAGGACAGA TTGGCAGTGT GGCACGCGTC
AGTTTTGTCT CGGAAGTGGC CGCTGAAATT GTCGTGGCTG CTGCGGAAAT CGATCTTCGG
AGTGATGTTC CCGCAGAAGT GACTCTGGGA AAAACCTTCG AAATGACGTT CCGGGTCAAG
AATCTCGGTA AAAACACGGC CAAAAATGTC ATCGTGCGGG ATCTGCTTCC AGAAGGAATT
GATCACCCTG CGGGCAAAGA TGTTGAGTAT CTCGTGGGTG ACCTCGCTCC CGGGGAATCT
CACGATGTGT TACTCGAAGT GGTGCCAACC CGTGTGGGTC GATTGAAAAA TCAGGTGACC
GTGCTCGCTC AGGGAATGCG GCCCATTGAA GCTCTGAAGG AGATCGTGGT TCTGGGGAGT
GGCCTGGCAA TTACTCATCA GGTTCCCTCC CGTGCCATCG TGGGACGCCC GGCCCGCTTT
GATAACCTGG TGCAGAATCA GGGCAGTGCG GTCTTGAGAA ACATCAAAGT CGTGGAGGAA
ATCCCAACCG GTTACGACTT TGCGGATGCC AGTGAAGGAG GCGATTTCGA TACCACAACG
CGCACCGTGA GCTGGGAAAT CCGTGAGCTC CCACCCGGGG CCACAAGAAC ATTGAGCACT
CGATTGACTG CCCGCCAGAC CGGTGAAGTG GCTGCCACAG TTTCTGCGAT CAGTGGTGAA
GGTGCGAAAG CGACTGTCAG TGCAACAGCA AAAGCCGAAG GGCTCCCTTC AATCACGATT
ATCCCGATGA ACGAAGAGAA GCTGATTGCT GTGGGTGAAC GCGTTCACTC TCGGCTCGTC
GTCAAGAATC GCGGCAGCGC ACCGGCTCAA AGTGTTGCAC TGGCGATCGA TATCCCTCCC
GGCCTGAAGC TCATCAGTGT GGATGGCCCT GTACAGCACA CACAGCAGGG TTCGCGGATC
ATTTTTCAGA TTCCCGGCTC GGTGGCGGCT GGAGCCGAAT TACCGTTCGA ACTCGAGTTA
GAAGCCTCTC GCGAAGGGGA TAACCCGATC GGTGTGCAGG TGGTGGCTGA AAACATGCTC
CGACCACTCC ATCGAGATGA CGTAATCCAG GTCATCACCG ATCCCGCAGC ACCAGGGTCA
AATACTGCTG GAAGCCGAGC CTCCACCCGC CGATAA
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| Protein sequence | MLSGFWKFAA LSVVVGVCSL VVVNVYGQLN QLNQLKQPLV HAGEISAEQG AETFPELDLA
VDASLPPVHE AHVSTNSTKV VPGETAKGPS SSRGLDFRLA AYQAGGEFPE ADPTDDEKQS
PVVRSQSANE PVSGPALVLP PPTVAEKDSA AAMPTPPVLP DLDAQPLTRT SGSARTAQIE
PTKEASGVAP RLLEIPDAQP IPIGQPTVGE KTPAGSRIQQ TSGIQNGEAD PFADAFPADL
PPLKNSAPAS SGREPAGAQP GDNQQPGDMQ PYRRPSMAPS APPAVIPEAD PFGLDTPATP
PAGNNSRDRL PSRNPSNREL PTDSGLPANG SGRTTPPTSL PVDLDVELGL PSQLPPAGST
NAPATGRNRN EPDRLRLVEP AIGPDRDFPG DEVPRTVLPP RNSGSRDLEN SSRTLPADND
PFGSEPVRGR LPQDPRGSIR DDFPQRRPVN EVVEPPFDSS NRPARPAVLP EPGAAAEPTA
RAVEQPRVVI EKQAPASAVL GQSLIYSVVV KNEGTVAARQ VIVEDRIPKG TQLTGTAPQA
EISDKRLIWK LGTLTPGETR TIQVRVTPVE EGQIGSVARV SFVSEVAAEI VVAAAEIDLR
SDVPAEVTLG KTFEMTFRVK NLGKNTAKNV IVRDLLPEGI DHPAGKDVEY LVGDLAPGES
HDVLLEVVPT RVGRLKNQVT VLAQGMRPIE ALKEIVVLGS GLAITHQVPS RAIVGRPARF
DNLVQNQGSA VLRNIKVVEE IPTGYDFADA SEGGDFDTTT RTVSWEIREL PPGATRTLST
RLTARQTGEV AATVSAISGE GAKATVSATA KAEGLPSITI IPMNEEKLIA VGERVHSRLV
VKNRGSAPAQ SVALAIDIPP GLKLISVDGP VQHTQQGSRI IFQIPGSVAA GAELPFELEL
EASREGDNPI GVQVVAENML RPLHRDDVIQ VITDPAAPGS NTAGSRASTR R
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