| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0551 |
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| Symbol | |
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| ID | 9137229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 689057 |
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| End bp | 690025 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003628598 |
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| Protein GI | 296120820 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.784831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAA ACCTCCCCAT TTCTTCCCGC CGGCAGTTTT TTGGCGATTT CACACATGGT
TTGACAGTCG CTGCGGCTAC CGCGGCTGGC TTGTCTGCAT CATCAGGTTC ACTCCTGGCC
AGCGAACCTG CGGTTCCCGC CAATGAGCTG CTCAAGAAGA AGACCCGCTT GTCGCTGGCG
GCATACTCCT GGAATGCCCG TCTCGCGAAA GCCTGGGATG AAAAGACTCC TCCCAAGGGA
GCGACGATCC CGACGTTCAT CGACTACTGC GCTTCGCTCG GCCTCGATGG CTGCGAATTG
ACAAGCTACT ACTTCCCCAA GGATGTCTCG CCTGAGTACC TCTACGCCTG CAAAAACCAG
GCATTCCGTA AAGGCCTTGA TATCACGGGG ACAGCCATTG GGAACGATTT CTGCCTTCCC
GAAGGCCCGG CTCTCGACGC CCAGATGGCG ATGACAAAGC AGTGGATCGA CAACTCCGTT
CTGCTGGGGG CACCGGTGAT TCGTATCTTC GCCGGGAAAG TTGCTAAAGG AGACACCGAG
GAAATTGCCT TCGAACGCTG CGTGAAGGGG ATCACCAAAG CGGTCGAATA TGCTGCCAGC
AAAGGGGTTT GCCTGGCACT GGAGAATCAT GGCGGGATCA CTGCCACACC CGAACAACTC
CTCAAAATCT ACCACGCTGT TCCCGCTTCT CCTTTCTTTG GAATCAATTT TGACAGCGGG
AACTTTCGGA CGGCGGATCC TTATGCCGAT CTCGAAAAAA TTGCCCCCTT CGCCATCAAT
GCGCAGCTCA AGGTGGAGAT GTTCAAGACC GACGGCAAGA AGGAACTGGC CGATATCCCA
CGCATTCTTT CCATACTGAA GAATGCCGGC TATCAGGGCT ATCTCATCCT CGAATACGAA
GCCGCCGAAA GCCCCGACGA GGCCATCCCC CGCTACGTGG AGACACTCCG AAAACTGCTG
GATGCCTAG
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| Protein sequence | MPENLPISSR RQFFGDFTHG LTVAAATAAG LSASSGSLLA SEPAVPANEL LKKKTRLSLA
AYSWNARLAK AWDEKTPPKG ATIPTFIDYC ASLGLDGCEL TSYYFPKDVS PEYLYACKNQ
AFRKGLDITG TAIGNDFCLP EGPALDAQMA MTKQWIDNSV LLGAPVIRIF AGKVAKGDTE
EIAFERCVKG ITKAVEYAAS KGVCLALENH GGITATPEQL LKIYHAVPAS PFFGINFDSG
NFRTADPYAD LEKIAPFAIN AQLKVEMFKT DGKKELADIP RILSILKNAG YQGYLILEYE
AAESPDEAIP RYVETLRKLL DA
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