| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0450 |
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| Symbol | |
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| ID | 9137114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 561032 |
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| End bp | 563506 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | DNA topoisomerase type IIA subunit B region 2 domain protein |
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| Protein accession | YP_003628499 |
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| Protein GI | 296120721 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCGACG CCGCCGCGAC GCCTGCCCCT TCGACGAGTG AGTACAGTGA AAAGAACATT
CGAGCCTTGG AAGGGATTGA AGGGATTCGT CTTCGCCCCG ACATGTACAT TGGCGATCGA
GGCTCCCGTG GATTGCATCA CCTCGTGTTC GAAGTGGTCG ATAACTCAAT CGACGAGGCT
GTGGCCGGCT ATGCCACCTG GGTCTCCGTG AAGATCAACG TCGATGGCAG TGTGTCGATC
ATCGACGATG GCCGCGGGAT TCCTGTCGGA GCGATGGCCG ATCAGGGTGG GAAGTCGGCA
CTCGAGATTG TCCTCACCAA GATTCATGCC GGTGGGAAGT TTGACCGTCA GGGTGGCTAC
AAGACCGGAA CTGGCGGCCT GCACGGCGTC GGCATCACAG CGGTCAATGC CCTCAGTGAG
TGGCTTTCAG CCGAGATCCG TCGTGAAGGC CATGTCTGGA CCATGGATTT TGCACGCGGC
ACCCGCACGA CCGAATTGAC CAAACTCGGC CTGGCCGATG TCACCGGCAC CAAGATTACC
TTCAAGCCCG ATTCCACCAT CTTTACCGAG AGCAAGTTCG TTTTTGATGT CCTTGCCAAG
CGGTTGCAGG AACTGGCATT CCTCAATGCA GGGATACATA TTCGCCTTGC GGACGAGCGA
ACAGAACAGT CCGAAGAGTT TCATTACCCC GATGGATTGC GAGAGTTCGT CAAACATCTG
AACCGCACCG AAACGACTTT GTACGCTGAT ATTCTTTCGA TTGAAGGAGA AATCGAGGGC
GTCAAGGTCA TGGTCTGCCT GCAGCACAAC GATGGCTTCA GCGAAACCGT GCGGGCATTC
GCCAACAACA TTTACAACAT GGAAGGTGGA ACTCACCTTT CGGGCTTCCG CTCGGCACTC
ACACGCGCCA TCAACAACTA TGGCAAGCGC GAAAACCTGT TCAAAGATAT CGACACCACT
GGTGATGACT TCCGCGAAGG TTTGGTGTGC GTGATTGCCG TCCGCGTGCC GCACCCTCAA
TTCGAAGGTC AAACCAAGAC CAAGCTTTCG AATGGGGAAG TGGAAGGGAT TGTCAACTCG
ATTGTCTTTG AAGGTCTCAC CAAGTTCTTC GAAGAGAATC CAGGGATTGC GAAGAAGATT
TGCCAGAAGG GTGCGATGGC GGCTGAAGCC CGCGAAGCTG CCCGCAAGTC CCGCGAGATG
GTACGCCGCA AAGGGGCTTT GACTTCTGGT GGACTGCCCG AAAAGCTGCG TGATTGCCGC
AGCCGAGAAC TTGACATCAC CGAACTGTAC CTCGTCGAAG GTGATTCAGC TGGTGGTTCT
GCAGATACTG GCCGCGACTC CAATACACAG GCCATTCTGC CACTGCGCGG TAAGATCCTG
AACGTCGAGA AGGCCCAGCT CGTCAAGATT CTCGACAATG CCGAAATTGC CAACCTGTTC
AAAGCCGTCG GCATTCCACC GATGGCTGAA TTGGAAGATG TCACTAAACG GCGGTACGGC
AAGATCATTC TGATGACCGA CGCCGACGTC GATGGCAGCC ATATCCGGAC GCTGCTGCTC
ACGTTTCTGT TCCGTCACAT GCGGGCTCTT GTGGAGCATG GCTGCATCTA CATTGCCCAG
CCGCCTCTTT ATCGAGTCAT TCAGAAAAAC AAGACTCGTT ATGTGCAGAC GCATGACATG
ATGATGACGG AGCTTATCGA ACTCGGGATG AACGGCACCC GGCTCGTTGA CCCGAATGAT
GGATTCACGT TTGAGGGCGA ATCACTCCGG CACGTCGTGA ATCTGATGCG GCGACTGGCT
GAACCTGTCG AGCTTCTCGA ACGACGGGGA ATTTCTCTGA AATCTCTCGA ACCGCTGCTC
AATGCGAGCT TTAAGCTCCC GCAGTATCGG GTCACGATTA CACGAACCGA CCACTGGTTC
CACACACGCG AAGATGTTGA GGCATTCCTG CAATCAGAAG CGGCTCGTCG CGGCAGCGAA
CTGAATATGG CGAACAGTGA TGCACAGCCT GTTGCCGCTG ATACAGCCAA GCCCGTCGAA
GGTGCTGCTC AACTGACAGA CCTTCACGAG ATCCGCACGC TGAACGACGT GCTCTCCGAT
CTCAGGGGGA TTGGAATTCA ATTCCGGCAT CTTATTCCGG CTGGGATGCG TGATGGGGAA
CTGGTTTTCC CCTTCCGGAT CGAACAAGAG AAGTCTGTTC TTAAGCTCCA AAGTCTCCGT
GAGCTTCTCG AAAAGCTCAG AGCACTCGGT GAAGATGGTC TGACAGTCAC CCGCTTTAAG
GGACTGGGCG AAATGGATCC CGAAGAACTT TGGGAAACCA GTATGCAACC CACCGCTCGG
ACGCTTCTGC AGGTTCGTAT GGACGATGCC GCAGCAGCTG ACGAAATGTT CCGCGTCCTG
ATGGGCGACC AGGTGGAACC TCGCCGGGAA TTCATCGAAA AGCATGCGCT GGATGTGAAA
GATCTCGACA TTTAA
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| Protein sequence | MSDAAATPAP STSEYSEKNI RALEGIEGIR LRPDMYIGDR GSRGLHHLVF EVVDNSIDEA
VAGYATWVSV KINVDGSVSI IDDGRGIPVG AMADQGGKSA LEIVLTKIHA GGKFDRQGGY
KTGTGGLHGV GITAVNALSE WLSAEIRREG HVWTMDFARG TRTTELTKLG LADVTGTKIT
FKPDSTIFTE SKFVFDVLAK RLQELAFLNA GIHIRLADER TEQSEEFHYP DGLREFVKHL
NRTETTLYAD ILSIEGEIEG VKVMVCLQHN DGFSETVRAF ANNIYNMEGG THLSGFRSAL
TRAINNYGKR ENLFKDIDTT GDDFREGLVC VIAVRVPHPQ FEGQTKTKLS NGEVEGIVNS
IVFEGLTKFF EENPGIAKKI CQKGAMAAEA REAARKSREM VRRKGALTSG GLPEKLRDCR
SRELDITELY LVEGDSAGGS ADTGRDSNTQ AILPLRGKIL NVEKAQLVKI LDNAEIANLF
KAVGIPPMAE LEDVTKRRYG KIILMTDADV DGSHIRTLLL TFLFRHMRAL VEHGCIYIAQ
PPLYRVIQKN KTRYVQTHDM MMTELIELGM NGTRLVDPND GFTFEGESLR HVVNLMRRLA
EPVELLERRG ISLKSLEPLL NASFKLPQYR VTITRTDHWF HTREDVEAFL QSEAARRGSE
LNMANSDAQP VAADTAKPVE GAAQLTDLHE IRTLNDVLSD LRGIGIQFRH LIPAGMRDGE
LVFPFRIEQE KSVLKLQSLR ELLEKLRALG EDGLTVTRFK GLGEMDPEEL WETSMQPTAR
TLLQVRMDDA AAADEMFRVL MGDQVEPRRE FIEKHALDVK DLDI
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