Gene Plim_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0406 
Symbol 
ID9137065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp509364 
End bp510422 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628455 
Protein GI296120677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCTGA AAACCAACCC CTACAGCCTT CGTTTTGCCG GGCGCGGATG CGATTCCAGT 
ACACAGTCAG ACGGTGGCTC CTCCGGGCCT CGTGCGGGCT TCACGCTGAT TGAATTGCTG
GCTGTCATTG TGGTGATCTC GATACTGATC GCTCTCCTCT TGCCTGCCAT TAACGGCGCC
CGCCGCAGAG CAACCATTGC TCAGGTGCGT ACAGAAATCA GTGCAATCGA ATCGGCCTGT
GTCGCCTTTG AGAAAGAGTA TGGAATCCAT CCCCCCAGCC GCATTGTCAT TCCACAAACA
GCGACACTCT GGGCCACTCC GGCGGATGGT GGGGTGGCAC CGAATTTGTA CACGGCTCAA
GAGATTCGCG AGTCCAAAGC CATTATCCGT CAGTTCTGGC CACAGTTTGA CTTTGCCTAT
ACCGCTGGTG CTCCGGATAT CGATGGCGAT GGGACGGCTG GTGGGAGTGC GATTGTGCTC
TCGAATGCGG AATGCCTGGC CTTCTTCCTG GGTGGTTTAC ACGAAAAGAC AGTTGAAGGT
TCCACCACGT TATGGCGGGC CATTGGTTTT TCCAAAGACC CGGCTGCCCC CTTCCGACGT
GGAACTGGCC CGCGCACCAC TCCTTACTAC GAACATCCTG CAAGTCGCTA TACCGATCTT
GATGGCGACA ATCTGCCAGA AATTGTCGAT CCCATCTCAG GGCAGGGTAC TCCTTATTTT
TACGCAGCCA CCACGAATGG TAAGTATGGC ATTTTAACTT ACGGCCCCCA GGGAAACTCA
GCTAACTACC CTATCCTCCC CTATGCACAG GATAAAGCCA ATAAGTCAGC CTGGAATGCT
AAATCTTTCC AGATCATCTC TCCCGGGTAT GACCAGACTT TCGGGCCGGG TGGGCCGTTC
CAACCTGAAG TCGCTACACC ATTGCCAGGT TACGCTGCCA CCGATATTCC TTCTGCTGTC
TGGGCACCGG GAATTACCGG GGCTGTGAGT GTGGCAGACC GCGAGGCGGA ATTCGATAAC
ATTACCAACT TTTATTCGGG AACACTGGGT GGTCGCTAG
 
Protein sequence
MFLKTNPYSL RFAGRGCDSS TQSDGGSSGP RAGFTLIELL AVIVVISILI ALLLPAINGA 
RRRATIAQVR TEISAIESAC VAFEKEYGIH PPSRIVIPQT ATLWATPADG GVAPNLYTAQ
EIRESKAIIR QFWPQFDFAY TAGAPDIDGD GTAGGSAIVL SNAECLAFFL GGLHEKTVEG
STTLWRAIGF SKDPAAPFRR GTGPRTTPYY EHPASRYTDL DGDNLPEIVD PISGQGTPYF
YAATTNGKYG ILTYGPQGNS ANYPILPYAQ DKANKSAWNA KSFQIISPGY DQTFGPGGPF
QPEVATPLPG YAATDIPSAV WAPGITGAVS VADREAEFDN ITNFYSGTLG GR