Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0406 |
Symbol | |
ID | 9137065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 509364 |
End bp | 510422 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003628455 |
Protein GI | 296120677 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCCTGA AAACCAACCC CTACAGCCTT CGTTTTGCCG GGCGCGGATG CGATTCCAGT ACACAGTCAG ACGGTGGCTC CTCCGGGCCT CGTGCGGGCT TCACGCTGAT TGAATTGCTG GCTGTCATTG TGGTGATCTC GATACTGATC GCTCTCCTCT TGCCTGCCAT TAACGGCGCC CGCCGCAGAG CAACCATTGC TCAGGTGCGT ACAGAAATCA GTGCAATCGA ATCGGCCTGT GTCGCCTTTG AGAAAGAGTA TGGAATCCAT CCCCCCAGCC GCATTGTCAT TCCACAAACA GCGACACTCT GGGCCACTCC GGCGGATGGT GGGGTGGCAC CGAATTTGTA CACGGCTCAA GAGATTCGCG AGTCCAAAGC CATTATCCGT CAGTTCTGGC CACAGTTTGA CTTTGCCTAT ACCGCTGGTG CTCCGGATAT CGATGGCGAT GGGACGGCTG GTGGGAGTGC GATTGTGCTC TCGAATGCGG AATGCCTGGC CTTCTTCCTG GGTGGTTTAC ACGAAAAGAC AGTTGAAGGT TCCACCACGT TATGGCGGGC CATTGGTTTT TCCAAAGACC CGGCTGCCCC CTTCCGACGT GGAACTGGCC CGCGCACCAC TCCTTACTAC GAACATCCTG CAAGTCGCTA TACCGATCTT GATGGCGACA ATCTGCCAGA AATTGTCGAT CCCATCTCAG GGCAGGGTAC TCCTTATTTT TACGCAGCCA CCACGAATGG TAAGTATGGC ATTTTAACTT ACGGCCCCCA GGGAAACTCA GCTAACTACC CTATCCTCCC CTATGCACAG GATAAAGCCA ATAAGTCAGC CTGGAATGCT AAATCTTTCC AGATCATCTC TCCCGGGTAT GACCAGACTT TCGGGCCGGG TGGGCCGTTC CAACCTGAAG TCGCTACACC ATTGCCAGGT TACGCTGCCA CCGATATTCC TTCTGCTGTC TGGGCACCGG GAATTACCGG GGCTGTGAGT GTGGCAGACC GCGAGGCGGA ATTCGATAAC ATTACCAACT TTTATTCGGG AACACTGGGT GGTCGCTAG
|
Protein sequence | MFLKTNPYSL RFAGRGCDSS TQSDGGSSGP RAGFTLIELL AVIVVISILI ALLLPAINGA RRRATIAQVR TEISAIESAC VAFEKEYGIH PPSRIVIPQT ATLWATPADG GVAPNLYTAQ EIRESKAIIR QFWPQFDFAY TAGAPDIDGD GTAGGSAIVL SNAECLAFFL GGLHEKTVEG STTLWRAIGF SKDPAAPFRR GTGPRTTPYY EHPASRYTDL DGDNLPEIVD PISGQGTPYF YAATTNGKYG ILTYGPQGNS ANYPILPYAQ DKANKSAWNA KSFQIISPGY DQTFGPGGPF QPEVATPLPG YAATDIPSAV WAPGITGAVS VADREAEFDN ITNFYSGTLG GR
|
| |