Gene Plim_0368 details

Gene Information

• Locus tag: Plim_0368
• ID: 9137027
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 457127
• End bp: 459151
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 54%
• Product: SNF2-related protein
• Protein accession: YP_003628418
• Protein GI: 296120640

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.375742
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGAAT CTTCAAAAAC AACGAGCGTG GCTCATACCC TTCGCACTGC TCCAGAACGT 
ACCAGTTCAG AGGGCTTGCA CGAAGGAGTC GAGCAGAATT CAAGCTCATC AGCTGTTCCG 
GCTCCCCATT GGTTGCCGCA GGTTCTCGAG TCAATTGCTC AGTACGACAA CCAGAATGTG 
GCTCCGCCTG ATACAAAGGA TGTGCCTCTC TCCATGGGGA CAGACCTGCA TCTGGCTGGG 
ATTAACAGTG CTCTGCAGCG TTTACCGAAA GTTGACGCCG AGCCTGTCAC TCTGATGAAA 
TCGATCCCGC TGGGGCCAGC CTGGAAGCCG AGCCGGCCAC GCATTCAGAC CTTTGGACTC 
AAGTTTCCTG AAGGTCTGGA GTTCTTGCCT CCACCGAAAC CGAAGGAAGA ATCTCGTCAA 
GAATCGATGG CTGAAAACGC CTCTGCGTCC GAAGCTGCCC CTGCACAGGA ATCCGTTTCG 
TCAGCAGCGG ATGTTACTGC CGCTGATCTC ATTGAGAAAT CCGAGGCGGC ACTGGTCGAA 
AAGCCCGAGG CTAAACTCAC ACGCATCAAG CCACCCGCAG GCGTTCTGAC TCTCGAAGAT 
CGATTGTTCT ATCTTTTGCA GCCCCCTTTG CAGACCTGGC TCAAAGGACA GGAACTCATC 
ATGCCCTTCG AGCCATTCCC TTATCAGTAC GAAGGGATTG CCTGGCTGTT CTCACACGAT 
GCAGCACTTC TCGCCGACGA GATGGGGCTC GGGAAAACGA TGCAGACCAT TACTGCCATT 
CGTTTGCTGG TGCGGAGTGG TCAGGTTCGC CGGGTGGTAC TGGTTTGCCC GAAACCACTT 
TTGCCCAACT GGCAGCGTGA GTTTCGCACA TGGGCAGAAG AACTCCCCTT CGTGGTGGTT 
GAAGGGGATA CCGATCGCCG CCGCATTACC TGGACAATGC CAGGTGTCCC TGTATTGATT 
GTCAATTACG AAACTCTCGT ACGGGATGTG GCGAATTTTG GCGACGAGTT TCCGAAGTTT 
GACCTGGTGG TGCTGGACGA AGCGCAGCGG ATCAAAAACC GCACGTCGCG AACTGCCGAA 
ACAGCGCGTC GGATTCCTCG TCGCAGAGCC TGGGCACTTA CGGGAACACC CATCGAAAAT 
CGGCCGGAAG AACTTGGTGC GCTCTACGAG TTTCTGGAAC TCGTCCCACC AGGCAGCACG 
CCCGATCTCA AGCAGTTACA GTCACTATCG AAGGAGTTTA TTCTTCGGCG GACCAAAGAC 
CTCGTGATGA AAGACATGCC TCCGAGGCTC GATCGCGATG CCATTCTCGA ATTGAGCCCC 
GCCCAGAGAT ATTCCTACGA TACCGCCGAG AAAGAAGGGG TCATCCAACT CAACGAAATG 
GGTGACAGCA TTTCGATTCA GCATGTGTTC GAACTGGTAT TACGGCTCAA ACAAATCACC 
AACTGGGATC CTCTGACGGG TGAGAGTGCC AAGTTCGATC GACTGGAAGC TGATATGGAG 
GAAGTGGCCG CCAGTGGTGG TAAAGCGATT CTTTTCAGTC AATGGACGAA GACACTCGAC 
TTTCTCAAAG AGAAGCTCGA GCGCTTTGGC CCACTGGTCT ACCACGGTGG AATACCCAAC 
AAACTTCGCG AACCGGTACT CAAACAGTTC AAAGAAGACC CCACCAAGCA CATTATCTTG 
ATGAGCTATG CCACTGGAGC GGTGGGGCTC AACCTGCAGT TTGCCGGGTA TGTTTTCCTC 
TATGATCGCT GGTGGAACCC GGCCATTGAA GATCAGGCCA TCAATCGCGC TCATCGCATT 
GGCTGCAAAA GCCAGGTGAT CGTGACGCGG TTCATTTCCA AAGACACCAT CGAAGAAAAG 
ATCGATCGCG TCCTCACTGA GAAACGCGAG TTATTCCGTG CCATTCTGGG CGATGGAGAT 
AACCTCAATG CGTCACTCTC GATGACCGCG TCGGAAATCT TTGGCCTGTT CGATCTGAAG 
GCCCGGCATG GTAAGGGAAC TCGCTCCATT GGCCCCAAGC CATAA 

 

Protein sequence

MDESSKTTSV AHTLRTAPER TSSEGLHEGV EQNSSSSAVP APHWLPQVLE SIAQYDNQNV 
APPDTKDVPL SMGTDLHLAG INSALQRLPK VDAEPVTLMK SIPLGPAWKP SRPRIQTFGL 
KFPEGLEFLP PPKPKEESRQ ESMAENASAS EAAPAQESVS SAADVTAADL IEKSEAALVE 
KPEAKLTRIK PPAGVLTLED RLFYLLQPPL QTWLKGQELI MPFEPFPYQY EGIAWLFSHD 
AALLADEMGL GKTMQTITAI RLLVRSGQVR RVVLVCPKPL LPNWQREFRT WAEELPFVVV 
EGDTDRRRIT WTMPGVPVLI VNYETLVRDV ANFGDEFPKF DLVVLDEAQR IKNRTSRTAE 
TARRIPRRRA WALTGTPIEN RPEELGALYE FLELVPPGST PDLKQLQSLS KEFILRRTKD 
LVMKDMPPRL DRDAILELSP AQRYSYDTAE KEGVIQLNEM GDSISIQHVF ELVLRLKQIT 
NWDPLTGESA KFDRLEADME EVAASGGKAI LFSQWTKTLD FLKEKLERFG PLVYHGGIPN 
KLREPVLKQF KEDPTKHIIL MSYATGAVGL NLQFAGYVFL YDRWWNPAIE DQAINRAHRI 
GCKSQVIVTR FISKDTIEEK IDRVLTEKRE LFRAILGDGD NLNASLSMTA SEIFGLFDLK 
ARHGKGTRSI GPKP