| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0323 |
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| Symbol | |
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| ID | 9136980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 402845 |
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| End bp | 404251 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_003628373 |
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| Protein GI | 296120595 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000670591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACA TCCGCAATCT CTTCAACAAA GTCTGGGATC TCCATGCCTG CCAGACACTT
CCTTCAGGTC AGGATCAATT GTTCATTGGC TTGCATCTGA TCCATGAAGT GACCAGTCCT
CAGGCTTTTG CCATTCTGCG AGAGCGGAAT TTAACGGTGG CTTACCCGGA ACGGACAGTG
GCTACGGTGG ACCATATTGT CCCCACACAG AGCACCGCGC GACCGTTTGT CGATCTTCTG
GCCGAAGAAA TGATGTCGGC AATCGAGAAA AACTGCCGCG ATTTTGGGAT TCGGCTCTTT
GATCTGGTTG ATAACCGCCA GGGCGTGGTT CACATTGTGG GGCCTGAGCA GGGCCTCACG
TTGCCGGGCA TGACCATTGC CTGCGGCGAC AGCCATACAA GTACGCACGG TGCGTTTGGG
TCGATTGCTT TTGGTATTGG TACCAGCCAG GTGGCCGATG TTCTGGCTAC ACAGACATTG
GCTCTGGCAC GGCCGAAAGT CCGCAAGATT GAAGTCACTG GCCAATTGAA ACCTGGTGTT
TACGCCAAGG ACGTCATTCT GCACATCATC CGCAAGCTCG GTGTGCAAGG TGGTGTGGGC
TATGCCTATG AGTATGCAGG TGATGTGTTC GACCGGATGT CGATGGAAGA GCGTATGACC
GTCTGCAACA TGAGCATCGA AGGGGGGGCC CGTTGCGGGT ACATCAACCC TGATCAGACG
ACAGTCGATT ACATCCAGGG GCGGCCTTTT GCGCCGCAGG GCGAAGAATT TGAGCGGGCT
GCCAAGTGGT GGTTGAGTCT GGCCAGTGGC AAGGACGCTC AGTTTGATGA CGTGGTTGTC
TTCAAGGCTG AAGAGATTGA ACCCACAGTG ACCTGGGGGA TTACGCCTGC TCAATCCGTC
GGTGTCAAAG AGACATTGCC GACGATTTCC AGCTTTCCTG CTGACGATCA GAAGGTGATC
AGCGAAGCCT TCCAGTATAT GGATCTGAAG GAAGGTCAGC CGATCCAGGG GCTCAAGATC
AATGTGGCGT TTATTGGTTC TTGCACGAAC GGTCGCATCA GCGATCTGCG GGAAGCTGCC
AGGATTGTCA AGGGGCGCCA TGTGGCTGCC GGTGTGAAGG CACTGGTCGT TCCAGGGTCA
CAACTGGTGC GTAAGCAGGC CATGGAAGAA GGGCTGGACA AGATCTTTGA GGAAGCCGGC
TTTGAGTGGC GAGGTGCCGG CTGTTCGATG TGCCTGGCCA TGAACCCCGA CAAACTTCAG
GGGAACGAAG TCTGTGCTTC CAGCAGTAAC CGGAATTTCA AAGGCCGCCA GGGGAGCCCC
ACCGGCCGCA CATTACTCAT GAGCCCCGCC ATGGTCGCCG CCGCCGCCGT GACTGGCGCC
GTGACTGATG TGCGGGAGCT GGATTAG
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| Protein sequence | MTDIRNLFNK VWDLHACQTL PSGQDQLFIG LHLIHEVTSP QAFAILRERN LTVAYPERTV
ATVDHIVPTQ STARPFVDLL AEEMMSAIEK NCRDFGIRLF DLVDNRQGVV HIVGPEQGLT
LPGMTIACGD SHTSTHGAFG SIAFGIGTSQ VADVLATQTL ALARPKVRKI EVTGQLKPGV
YAKDVILHII RKLGVQGGVG YAYEYAGDVF DRMSMEERMT VCNMSIEGGA RCGYINPDQT
TVDYIQGRPF APQGEEFERA AKWWLSLASG KDAQFDDVVV FKAEEIEPTV TWGITPAQSV
GVKETLPTIS SFPADDQKVI SEAFQYMDLK EGQPIQGLKI NVAFIGSCTN GRISDLREAA
RIVKGRHVAA GVKALVVPGS QLVRKQAMEE GLDKIFEEAG FEWRGAGCSM CLAMNPDKLQ
GNEVCASSSN RNFKGRQGSP TGRTLLMSPA MVAAAAVTGA VTDVRELD
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