Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0161 |
Symbol | |
ID | 9136815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 215149 |
End bp | 216234 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | protein of unknown function DUF1559 |
Protein accession | YP_003628212 |
Protein GI | 296120434 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0998641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCACGTC GACGTCGGGG CTTTACGCTC ATTGAATTGC TGGTTGTTAT TGCCATTATT GCCATTTTGA TTGCCTTGCT GCTCCCGGCA GTTCAACAGG CGCGCGAGGC CGCTCGCAGA ACTCAATGCC GCAACAATCT GAAGCAATTA GGGTTAGCGC TTCACAATTA CCATGATGTC TTTGGCACAT TTGTCTACCG CAAGGGTGGG ACAGGTGCCT ATGGAGCAAC CCCACAGCAG AATTCTGGTC GCCGGAGTGG GTTGGTCAGC CTGTTGCCCT ACATCGATCA GTCACCGCTT TACAACCGTA TTGAGGCGGG TGACCTGGCT GGCACCAGTT ACGGTGGCAC TGCTGTCGCT CCTGGCGGCC CTCATGGCTG GGCTAGCTGG TCAACCTGGA ATGTTTCGAT TCCCGGTTTC CAATGCCCCT CCGATGCCTA CGCAACTCCT GTGAGCACTC ACAACTACAT GTTTTCTGTG GGCGACACGA TTCAGGATCC CAACAACACG GGCACATCGA ACCATGATCT GCAGAACGTC AATGGCCTGT TCGCTAACCG TCGCTGCCTG GGTGTGCGTG ATATTACCGA TGGTACCAGC AACACCATTG CCATGAGCGA GCGTTGCCGG GCGAACTTCG GGTTGGCCAC CAACAGCAAC CGTCTGGTCG TCGAGGGTCA GGCAATGAAC AAAACCGGCT TGCAGGCCAA TCCTTTGCAG TGCCGCAGCA TCGCGACCAA TGGCCGTTAC AATGCTGCTG AAGAGGTTAA AGGATATTCG GGAACTCGTT GGACTGACGG CCAGATCGAA CGATGCGGCT TTCATACAGT ATTGCCACCC AACTCTCCCT CTTGTGCCGA AGGGAACAAT GGCAACGCTG ATTCTCCCGT GAGTGTCATT ACTCCCACCA GCCGACATAC CGGCGGTGTC CATGCTCTGA TGGCAGACGG TGCTGTTCGC TTTATCAGTG ACAACATCGA CACAGGGAAT CTGGCAACCG GATCGACAAT CGGCGGCCCC AGTCCTTATG GCGTCTGGGG TGCCTTGGGA ACACGCGCCG GCGGCGAAAC AACTGGTAAT TTCTAA
|
Protein sequence | MSRRRRGFTL IELLVVIAII AILIALLLPA VQQAREAARR TQCRNNLKQL GLALHNYHDV FGTFVYRKGG TGAYGATPQQ NSGRRSGLVS LLPYIDQSPL YNRIEAGDLA GTSYGGTAVA PGGPHGWASW STWNVSIPGF QCPSDAYATP VSTHNYMFSV GDTIQDPNNT GTSNHDLQNV NGLFANRRCL GVRDITDGTS NTIAMSERCR ANFGLATNSN RLVVEGQAMN KTGLQANPLQ CRSIATNGRY NAAEEVKGYS GTRWTDGQIE RCGFHTVLPP NSPSCAEGNN GNADSPVSVI TPTSRHTGGV HALMADGAVR FISDNIDTGN LATGSTIGGP SPYGVWGALG TRAGGETTGN F
|
| |