Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0116 |
Symbol | |
ID | 9136770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 158867 |
End bp | 160249 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | L-serine dehydratase 1 |
Protein accession | YP_003628168 |
Protein GI | 296120390 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.117006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGTCA GCGTGTTTGA TCTGTTCAAA GTAGGGATTG GACCGTCCAG TTCTCACACC GTCGGCCCTA TGAAGGCGGC TCAAATCTTT GCTCAGCGAC TGGTTGACCA GGGCCACCTG GAAAAGCTGG GGATGGTGCA GGCTCACCTG TTTGGTTCGC TGGCACTCAC CGGCAAAGGC CACGCGACAG ATTCGGCAGT CATCTGGGGA CTGGCTGGTG AAATGCCGGC GACAGCCCAG TCCGAGAATC TCGCCAGAAT TCTTGATCGA GTCCAGAAGG AACATCGCCT TCCCATCGGA GGGACAGATC ACGAGATCGA GTTCCTCCCC GATCGGGACA TCTTCTTCCA TTATAATGAG GTGTTGCCAC AACACCCCAA CGGCATGAAG TTCGTCGCAC TCGACAAAAA TGGCCTCCCA CTGGCGATGG AGAGTGCGTT CTCCGTCGGC GGCGGATTCG TCATTTTTGA AGGGGAAGAC CAGGCACAGA CATCAACCTC ACCACAAGTC GAAATCCTCT TCCCCTTCAC GACGGCTGCC GAACTTCTCG AAATCGGTAT CCGTGAGAAA AAGTCGATTG CTGCCATTGT CCGCGAGAAT GAACGAGCCT TCCGCACGGA TGCTGAGATC GATGCCGGCC TCGACCGCAT CTGGGAGGTC ATGCAAAGTT CCATCGATCG AGGTTGCCGC ACCGAAGGGA TTCTTCCTGG TGGCCTGAAC GTCAAACGCC GTGCCGCGAG CATGTGCCGC ACACTCATGA CCTCTGGTCC TCGTCCGATT GATCCGCTGC AAAGCCTCGA TTGGGTGAGT CTGTTTGCAC TCGCCGTCAA TGAAGAAAAC GCTGCCGGTG GTCAGGTGGT GACAGCACCC ACAAATGGAG CAGCCGGAGT CATTCCTGCT GTGATTGCTT ATTACAAACG TTTATTGGCA GGTGCCACAC AGGAAGGTGT TCGCACCTTC CTGTTGACGG CAGGTGCCAT TGGTATGCTC TATAAGCGTA ATGCCTCACT CTCTGCTGCC GAGATGGGTT GTCAGGGTGA AGTGGGCGTC GCCTGTTCAA TGGCTGCCGG TGGCCTGGCT GCCGTCATGG GTGGCTCGAA CGAACAGATC GAGAACGCTG CGGAAATTGG CATGGAGCAT AACCTGGGCC TGACCTGCGA TCCCATCAAA GGTCTCGTGC AGGTTCCGTG CATCGAACGC AACACGATGG GGGCTGCCAA AGCCATTAAT GCCGCCCGGC TCGCTGTGCT GCATGGAGAT GGCACCCACC GCGTCTCGCT CGACCGCGTC ATCGAAACCA TGCGCCAGAC AGGTGTCGAT ATGCAGGTCA AATACAAGGA AACCTCCATT GGAGGACTTG CAGTCAACGT CGTTGATTGC TGA
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Protein sequence | MYVSVFDLFK VGIGPSSSHT VGPMKAAQIF AQRLVDQGHL EKLGMVQAHL FGSLALTGKG HATDSAVIWG LAGEMPATAQ SENLARILDR VQKEHRLPIG GTDHEIEFLP DRDIFFHYNE VLPQHPNGMK FVALDKNGLP LAMESAFSVG GGFVIFEGED QAQTSTSPQV EILFPFTTAA ELLEIGIREK KSIAAIVREN ERAFRTDAEI DAGLDRIWEV MQSSIDRGCR TEGILPGGLN VKRRAASMCR TLMTSGPRPI DPLQSLDWVS LFALAVNEEN AAGGQVVTAP TNGAAGVIPA VIAYYKRLLA GATQEGVRTF LLTAGAIGML YKRNASLSAA EMGCQGEVGV ACSMAAGGLA AVMGGSNEQI ENAAEIGMEH NLGLTCDPIK GLVQVPCIER NTMGAAKAIN AARLAVLHGD GTHRVSLDRV IETMRQTGVD MQVKYKETSI GGLAVNVVDC
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