Gene Plim_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0041 
Symbol 
ID9136694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp54779 
End bp55603 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628093 
Protein GI296120315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.4713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATG AAAAACGAAC GGCCGTCAGT TATCTCGTGT TTGATATTGA AGCGATTGCC 
GATGGTGAGC TGGTTTCCCG CATCCGCTTT CCCGGTGAAA ATCTCTCGGC AGAGGCAGCC
ATTGCGAAGT ACCGCGCCGA GTTGATGGAA ACGACGGGAA AAGATGTTCT CCCCGTCACC
TACATGCTTC CTGTCTCGGT GGCCATTGCC AAAATCGATC CCGAGTTTCG CCTGCTCGAT
CTGGTCGTTC TTGATGCACC GGAGTATCGC CCACACCGGA TTGCTCAGCT CTTCTGGCAG
GGTTGGCAGC ATTATGGCTA TCCCACACTG GTCAGCTTTA ATGGCCGTTC TTACGACATG
CCTGTGCTGG AACTGGCGGC ACTGCGCTAT GGTTTCTCGA TCCCCGCATG GTTCTCATTA
GAACTGAGAT CATTCGAGCA GCCCCGCAAT CGCTATAACA GTTCGTCTCA CTTCGACCTG
TGCGACTTTT TCTCGAACTT TGGTGCCACA CGACTTTCGG GCGGGCTGAA TCTCCTGGCC
AACGTGCTGG GAAAGCCCGG CAAAAGTGGC ATCGATGGTT CGATGGTGCA GGATTTTCAT
CATCAAGGAC GCGACGAAGA AATCAACGAC TACTGTCGCT GTGATGTGCT GGATACCTAT
TTTGTCTTTC TGAGAAGCCA GGTTCTGCAG GGCAAGTTGA CACTTCAGCG TGAGCAACAA
CTGGTGGGTG AAACGAAAAC ATGGCTGGAA AATCAGGCAG ACAATTCACC GGCCTATCAG
CATTATCTCT CGCATTGGGG TGATTGGCAG CCTCCACCCG CTTAA
 
Protein sequence
MADEKRTAVS YLVFDIEAIA DGELVSRIRF PGENLSAEAA IAKYRAELME TTGKDVLPVT 
YMLPVSVAIA KIDPEFRLLD LVVLDAPEYR PHRIAQLFWQ GWQHYGYPTL VSFNGRSYDM
PVLELAALRY GFSIPAWFSL ELRSFEQPRN RYNSSSHFDL CDFFSNFGAT RLSGGLNLLA
NVLGKPGKSG IDGSMVQDFH HQGRDEEIND YCRCDVLDTY FVFLRSQVLQ GKLTLQREQQ
LVGETKTWLE NQADNSPAYQ HYLSHWGDWQ PPPA