| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0001 |
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| Symbol | |
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| ID | 9140967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 614 |
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| End bp | 3166 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_003628053 |
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| Protein GI | 296120275 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCCG GCATGATGCT GGCGAACCCC GGAATCAATC ATGATGAACG AGATCAACAA
CAGACAGTTC AGGCTCCCGC CGCCCAGGTA CGAGGCGTGC CACAGCTCAT ATCTCAGAAC
GCCGATGGAC AGATTGAATC TGATGTTCAG ACCGCTGCTG AGCGGGCACG GCTCAATGAG
GGTCTCGTCA GGCAGAATGC TCTGACTGGA CACCTTCCAG CAGAGCGTTT TCCAGTACAG
CGTCATCCAG TACAGCATGC CGGGAAACAG CACTCTCTTC CCACGAGAGC CAAACTTCCG
CAGGAAGCGG CTTCCTTAGG ATCTGTCCTG ATTAAGGCAG GTCTTTGTCA CGCCACTTCC
AGCCGAACGA ACGGATCGCT GCAATCAGCA GATGACCGCG ATGTCTCTGT TTCGTCGATC
GTTGCGAACC AGGCGCCTGT GAAACGATCC GCCGCCACGG CCAGTGTTTC GCCGGACCTG
ACAAAGGGGG CACCGGATTC TGCCAAAGCA TTATTGTTCA ATACGGCACC AATATCTGAT
GTAGGGGCCT TGCAGATCTT TCAAGAAGCA TTGATCGAGG CCATTGGGTC ATCTCGATAT
GAGATGCTCT TTGCTCGAAA AGTCACTTTC GACTGGCAGC AAGTGGCGGC CACAACGTCT
CATCATCAGG CGGGGCGACT GGTACTGCGA ATTGAAGACG AGTTCTTACG AAACTGGCTG
AGGCGCGAAT ACCATCCCCT GCTGGAGCGA CTGGCTCGTG AGTGTCTGCA GGGAAGTACG
ATTTTATTCA GTGAAGATGC GTCACTTGGT CAAAGCGTAT CCTCTGCGAA GATCACACCA
TCTCACACGA CGGATCACCA AACAACGATA TCACGGAATC CCTCTGAAAA GATTTCCACA
ACAAATACTG GAGTGATTGC ACAGCTTCCC GCACAGAATC ACATGCCTTC TCGGAACCCG
AGAAAGTCGG CTGTCTCTGA CTTGAAGTTG GGAGCCACAA TCTCCACAAT CCCCTCCCCG
GACCAACCGG CTGAGCATCA TGCAGCAGAT CAGTCTTCTG GTGCTGCTGA ACAGCGTATT
GATAGACAGT GTGCCAACAA ACCAGGTGCC AACAAATCGT CGAGAGTTCT TCCAGTCAGT
GATTTTCCGG GAGCCAATCT CGACGTGATG CAATCTGAAT CTGCCCATAA TCCTGCTTCC
CAGAACCTGC CACTGGCTGC CACGCCCTTG GCCAAAAGCC AATTGGCGGC TGGGAATAAA
GTCGCTGATG ATCAGGTTGT CGCCAGCGCA GCAGGCAGAA ATCCGCTGGT CTCTCAGATG
GCAGGTCCTC GCCGGGGGGC ATATGTCGCA TCGACGGCCT TCGGATCAAC GAACCAAGTG
CCAACGGCCC AGGCGCCAAC AAACCAGGCG TCTGGTTTCT CCTCAGCATC TCACGAATCT
CGTTCCAATT CAGGAGCGGC ATCTCATCAT TCAGCTCCGG CTCATCTGGG GAGAACAAAC
GCTGCGAAAA TGTCGCGTCG CCCGATGGAA CTGAGTGATC TCGTCGTCGG TACAGGGAAT
GAACTGGCTC TGGCAGCGGC CCGCAAAGTT TGCGACGAAG TACCGGCTCC ATTCAATCCA
CTCTATCTGT TTGGAAACGT GGGAATTGGC AAGACCCACC TGCTGGAAGG AATTTCCCGG
CAATTGCGCA GGCAGCATCC CGGGCTCAAT GTACTGATGA TGACCGCCGA ACAGTTCGCC
AACTGTTTTA CCCAGGCACT GCGTGACAAA ACGTTGCCTT CATTCCGGCA GAAGTTTCGC
AATGTCGATG CTCTCCTCAT TGATGATGTG GATTTTCTCG ATAATACGCG GGTGATACGC
GAAGAGTTTC TACATACATT TACCGAACTC GCAGAACGTG GACGGGCGAT TGTGCTGACG
GCTGATCGGC ACCCTAAACT CCTCTCGAAA CTGGGGGATG AACTGGTCAC TCGGTTCATG
TCAGGGCTGA TCTGTCGAGT GGAAGCACCT GATCAGGCCA CGCGTGAACG GATTGTGCAG
ATGAAAGCGG CCCGTATGGG TACCGATATC AGTGAAGAAG CACTGATGTG GGTGGCGCAA
AAATTCCGCA ACAATGTGCG GGAACTCGAA GGGGCTCTCA ACTGCCTCCA CACGTGGTAC
ACAATGAGCG AACGGCGGGT CGGTCTGGCC ACGGCACGGC AGATTCTGGC CGACCTTGAG
CGTGATTGTC TGAAGATCGT CAGGCTGACC GATATCGAGC AGACGATCTG TACGCTCTTT
GGCGTGCGGC CTCGTGAACT GAAATCATCC AGCCGGGCCC GCACAGTGAG TCAGCCGCGA
ATGCTCGCGA TGTTTCTGGC AAGAAAACAT ACGCAGTCAG CTTATCAGGA AATTGGCCAG
CATTTTGGCG GGCGGAATCA CAGCACCGTG ATGGCTGCCG AGAAAAAAGT GGGCGAATGG
CTCGATTCGA ACAGCGAGCT TCATCTGGGT GGACGAGACT GGAACATTCG CGAACTGATG
GACACCCTCG AACAACAGCT TCTGGCCAGT TGA
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| Protein sequence | MQPGMMLANP GINHDERDQQ QTVQAPAAQV RGVPQLISQN ADGQIESDVQ TAAERARLNE
GLVRQNALTG HLPAERFPVQ RHPVQHAGKQ HSLPTRAKLP QEAASLGSVL IKAGLCHATS
SRTNGSLQSA DDRDVSVSSI VANQAPVKRS AATASVSPDL TKGAPDSAKA LLFNTAPISD
VGALQIFQEA LIEAIGSSRY EMLFARKVTF DWQQVAATTS HHQAGRLVLR IEDEFLRNWL
RREYHPLLER LARECLQGST ILFSEDASLG QSVSSAKITP SHTTDHQTTI SRNPSEKIST
TNTGVIAQLP AQNHMPSRNP RKSAVSDLKL GATISTIPSP DQPAEHHAAD QSSGAAEQRI
DRQCANKPGA NKSSRVLPVS DFPGANLDVM QSESAHNPAS QNLPLAATPL AKSQLAAGNK
VADDQVVASA AGRNPLVSQM AGPRRGAYVA STAFGSTNQV PTAQAPTNQA SGFSSASHES
RSNSGAASHH SAPAHLGRTN AAKMSRRPME LSDLVVGTGN ELALAAARKV CDEVPAPFNP
LYLFGNVGIG KTHLLEGISR QLRRQHPGLN VLMMTAEQFA NCFTQALRDK TLPSFRQKFR
NVDALLIDDV DFLDNTRVIR EEFLHTFTEL AERGRAIVLT ADRHPKLLSK LGDELVTRFM
SGLICRVEAP DQATRERIVQ MKAARMGTDI SEEALMWVAQ KFRNNVRELE GALNCLHTWY
TMSERRVGLA TARQILADLE RDCLKIVRLT DIEQTICTLF GVRPRELKSS SRARTVSQPR
MLAMFLARKH TQSAYQEIGQ HFGGRNHSTV MAAEKKVGEW LDSNSELHLG GRDWNIRELM
DTLEQQLLAS
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