Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3611 |
Symbol | |
ID | 5454118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3868245 |
End bp | 3868850 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640879195 |
Product | scaffold protein Nfu/NifU |
Protein accession | YP_001414866 |
Protein GI | 154254042 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0694] Thioredoxin-like proteins and domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGACA GCCCGCTAAA CCACCCCTCT CACAAGGGTT TTGTCATGTT CATCCAGACC GAGGCGACGC CGAATCCGGC GACCCTGAAA TTTCTGCCCG GACGCGAAGT TCTGGGTGAA GGGCGCGCCG CCGATTTTCC GACAGCGGAA GCCGCCGCGC GTTCGCCGCT CGCTATGCGC CTCTTTGCAG TCGAGAACGT GACGGGTGTT TTTTTCGGCT CGGACTTCAT CACCGTCACC AAGTCGGGTG GCGAGTGGCA GCATCTGAAG CCGGCCCTTC TCGGCGCGAT CATGGAGCAC TTCACCGGCG GCGCGCCGAT CCTTTTCTCC GCCGCGCCAG ATGATGACGA TGCCCATGCC GCGCATGAGG GCGAAGACGG CGAGATCGTT ACCCAGATCA AGGAAATACT CGATACCCGC GTCCGCCCTG CCGTCGCGCA GGATGGCGGC GACATCACGT TTCAGGGCTA CGAGGAAGGC GTCGTCTTTC TCAACATGCA AGGCGCCTGC GCCGGTTGTC CTTCTTCCAC CGTCACCTTG AAGCGTGGCG TGGAGAACAT GCTGAAGCAT TACATTCCCG AGATCGTCGA GGTCCGCCAG GTCTGA
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Protein sequence | MRDSPLNHPS HKGFVMFIQT EATPNPATLK FLPGREVLGE GRAADFPTAE AAARSPLAMR LFAVENVTGV FFGSDFITVT KSGGEWQHLK PALLGAIMEH FTGGAPILFS AAPDDDDAHA AHEGEDGEIV TQIKEILDTR VRPAVAQDGG DITFQGYEEG VVFLNMQGAC AGCPSSTVTL KRGVENMLKH YIPEIVEVRQ V
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