Gene Plav_3565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3565 
Symbol 
ID5456657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3815626 
End bp3816123 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content63% 
IMG OID640879149 
ProductMarR family transcriptional regulator 
Protein accessionYP_001414820 
Protein GI154253996 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGA AAATCGAATG CAGCGACGCA GAGCGCAAAC ATGCAGACGC CGTGGTGGAA 
AAACTCTACC GGCTGATGGT GCGCGCGCAT GAGTTTGACG CAAGGCCGCG CGAGTTCGGC
ACCGGCGCGG CGCTTAGCCG CGCAGAGATA CACACGGTGC AGGCGGTGGG GCTGGCGGGG
GAGATCAACA TGACAGGGCT TGCCGCAGCG CTGGGTGTCA CAAAAGGCGC CGCCTCGCAA
ATGGTGGCGC GCCTGGCCGG CAAAGGCCTG ATCGAGAAGC GCGCCAATCC GAAGAGCGGA
CGCGAGGTGT CGCTTCTCCT GACACCGCTC GGCAAACGCG GCCATATCCA GCACGAAAAA
TTTCACCGGC AGATGGCCGT ATCCTTCAAA GCGGCGCTCG GTACGGCGTT CACGGAAAGG
CTCGACCTCT TTTCGGAGGC GCTGGACGGA CTGCTTGACG TCATCGAGGT TCACGAGAAG
CGCACGGGCG AGCGCTGA
 
Protein sequence
MTKKIECSDA ERKHADAVVE KLYRLMVRAH EFDARPREFG TGAALSRAEI HTVQAVGLAG 
EINMTGLAAA LGVTKGAASQ MVARLAGKGL IEKRANPKSG REVSLLLTPL GKRGHIQHEK
FHRQMAVSFK AALGTAFTER LDLFSEALDG LLDVIEVHEK RTGER