Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3543 |
Symbol | |
ID | 5454073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3786982 |
End bp | 3787263 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640879127 |
Product | conjugal transfer protein trbB |
Protein accession | YP_001414798 |
Protein GI | 154253974 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5268] Type IV secretory pathway, TrbD component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCGG CGTTCGAACA ACTCGACGCG GTGCCGGGTT TCACCGTCCC GGTTCACCGG GCGCTGACCG AGCACATTCT GCTCGGCGGC GCACCGCGCG CACTCGCCAT CCTGAACGGC ACGCTGGCCG GAGCCGTGGG CCTTGGCCTG CGCCTCTGGC TCGTCGGTCT GCTGATCTGG GCCATTGGCC ATATCGCAGC CGTATGGGCT GCAAAGCGCG ATCCCCTCTT CGTCGAGGTC GGTCGCCGTC ACCTGCGCAT CCCCGCTCAT CTGTCCGTCT GA
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Protein sequence | MAAAFEQLDA VPGFTVPVHR ALTEHILLGG APRALAILNG TLAGAVGLGL RLWLVGLLIW AIGHIAAVWA AKRDPLFVEV GRRHLRIPAH LSV
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