| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3509 |
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| Symbol | |
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| ID | 5455199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3755948 |
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| End bp | 3758722 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640879094 |
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| Product | exonuclease V subunit alpha |
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| Protein accession | YP_001414765 |
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| Protein GI | 154253941 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.996983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGAG ATCACTCCGA CAGCTTCAAT TTCCTTCAGC GGTTCTGGCC AGATCTCCAT
GATCTCGGGA GAAAGGCGGA ACAGGCTGGA CCGCATGAGC CGGACCTCGT GGCCATCCGG
CTGCGTGGGC TTACCGAGAC GATGGTCGTC AAACTGTTTG GGCAACTGGG ACTTCAGTAC
GACCCGGCGC ATTCGCATTT CGACAGGTTG GTCCTGTTGG AGAATGCAGA CCTGCTCGAC
GCCCGTCTCC TTTCCAAATT TCACGCTATC CGGAAGGTCG GCAACAATGC CGCACACAAC
GGGAAGGTTA CGCCGGCACA AGCTGAAGCT CTTTTGGAAG ATGCTTGGTC TCTTTCGTGC
TGGTTCTGCC GCTTCATGCG TCCCGACATC GAATGGCTGA CTCCAGCGAG GCAGAACGCC
AATCCCCTCT CGGTTCCATC CATGGTGGAA ACGCAGGACG TTTCTGCCGA GCGGCAGCCG
ACGGTCCCGG GTAAGTCATC GAACATACTC AAGTTTCCCG AGGAGCGCGT CCGGCGCATA
CGGGAGCAGG TCTCCCGCGC GATGGCGGAA GTCGATCCGA GGGTGCGCCA ACTTCGGACC
AGCATCACAC TTCACGAGGC CTTTACGGAA AGTCTGTCGA GCGACCAAGC CGCCTGCCTC
GACGCGCTTT CCACATTCCT CTCCAGTCCG ACGCAGCATG TATTCCTGCT CAAGGGCTAT
GCGGGCACCG GCAAGACCTT CCTCGCCAAG GGCATCACCG AATATCTTTC GGCACAGGGT
CGCGCTTTCC GCCTCGCAGC ACCGACCGGG CGGGCGGCGA AGATTATCTC GGAGAAGACC
GGGCGCGACG CGCGGACGGT GCATAGCCAA ATCTACAACT TCAGCGACCT GAAGGAATAT
ACGAAGGGGG ATCAGGAGGT TGGGTCGGAG ACGTTCAAGT TCTATGCGGA GATCGCGGCC
AACCAAGATC AGGCCAATAC GGTCTATATC GTGGACGAGG CGTCGCTTCT TTCGGACGTC
TATTCGGAGA GCGAGTTCTT CCGATCGGGA ACCGGATACC TGTTGCACGA CCTGATTAGC
TATGTCGGAT TCAAGCATGG CGAGACCGAC CGGAAGATTA TCCTCGTAGG CGATCCCGCT
CAGCTTCCCC CGGTGGGGAT GTCCGTCTCC CCAGCGCTTG ATACGGAGTA CCTCCACAAG
CACCTCGGGT TGGATGCGGC CGAATACGAG TTGAAGGAAG TACTGCGGCA GAAGGCGGAT
AGCGGGATTA TCCGTAACGT CATGCCGCTT CGCGATAGCC TTTCAAAGGG CACATTTGGT
AGCCTCAGCT TCGAATTCGA CGAAGATGTC CTGCGTCTCC GCGCCGACGA GGTTCTCCCG
TTATATATGG CGGCACGCTC TACCGGCGAA GCGAACATTC CGATTGTCAT TACGCGGTCT
AACAGCGAAG CGGCCAGTTA CAACCGGGCG ATCCGGGATG CACTTTTCCC CGGACGTGAC
TTCGTGGCGG CCGGTGATCG GCTGATCGTC ACCGCCAACG CCGTTGTGAA CGGCAGCTTC
CTGGCTAACG GTGAGTTTGT CGATGTCGTC GATGCGGAAA CCATGGTGGA GCGGCGGTCC
GTCAATCTCC GATACCGTAA CGAGGAGACC GGGGCAGTCG ACGTCATCGA GGTGTCGTTA
GTGTTCCGCG ACATCCAGAT AACCGTTTCG TCGCCAGATG GCGCCGAGAC CGTTCTGACC
GCGAAAATCC TCGACGATCA TCTTCACGAT AGCGGGGCCG GGCTCGACGC TGCGCAGCAG
CGCGCGCTCT ATGTGGACTT CCTCAAGCGT CACCCTGATT TGAAGCGCGG CCACGACCGA
GAACGCCTCA GCCAGATCAT ACGCCAGGAC CCGTACTTTA ACGCGCTCCG CGTAAAGTTC
GGCTACGCGG TGACTTGCCA CAAGGCGCAG GGTGGCGAAT GGGGGCATGT GTTCGTGAAT
TGCCCGTCTG GCCAGAATCC GAGATCGGCC GAGTATTTCC GTTGGCTCTA TACGGCCATG
ACCCGCTCAA GCGGGAAGCT GTATATGATC GACCCGCCCG AAGTCAGGTT GAAGGTCGCC
GGACCTGACT GGTGGTCGCC TTCGGAGGTA TCGACGACAT CGACGGATGG GCAGCTCTCG
GCAGCTGCGC AGGCGGGAGG CACCGCCTCA ATCATATCGC CCCAGGAGGC ATTCCGCCTC
GGTGTTCTGG CGCGCGTGCG GGACCTTCTC GGGGAGACGG GCATCGAGAT CGACGATGTC
GCGCATCACC AGTACCAGGA AGCCTTCTAC CTGCGTCGTG ACCTCGACAC CGCCCGCGCT
AACATCAGTT ACAATGGCAA GTTCAAGGTT ACAGCGGTGG CTGTTCCTCC CGCAGGCGCT
TTCAGCGAGC AGCTAGGCGA GCTTCTTCGG CCGTTGGTCG GTCAGTCCAT TGGCTCGGCA
CTGCCAGTCG CCGGCACGGG TGGCTCGTCG GGCCTGCAAT CGCCAAGCCG CCCTTTCCTT
GCACAGTTCC ACGACCGCCT GTTGCCTCTT CTCAGGGAAC GCCAAATCCA CATTGTGGGA
TTGAAGGAAC AGGCGTGGAG CCAGCGCTAC ACCTTCTCGC GTGGCGGTGA TGCTGCCGTC
GTCGATGTCT TCTACGACGG ACGAGATCGG TTCACGAAAT GCATGCCGAT CAACGTCGGG
GGAAGGCAGG GCGTCCCAGC GGGTACGTTG TTGCCCGAGG TGCTTGAGAT ACTCACCGCG
CAGGTCATCC CGTGA
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| Protein sequence | MIGDHSDSFN FLQRFWPDLH DLGRKAEQAG PHEPDLVAIR LRGLTETMVV KLFGQLGLQY
DPAHSHFDRL VLLENADLLD ARLLSKFHAI RKVGNNAAHN GKVTPAQAEA LLEDAWSLSC
WFCRFMRPDI EWLTPARQNA NPLSVPSMVE TQDVSAERQP TVPGKSSNIL KFPEERVRRI
REQVSRAMAE VDPRVRQLRT SITLHEAFTE SLSSDQAACL DALSTFLSSP TQHVFLLKGY
AGTGKTFLAK GITEYLSAQG RAFRLAAPTG RAAKIISEKT GRDARTVHSQ IYNFSDLKEY
TKGDQEVGSE TFKFYAEIAA NQDQANTVYI VDEASLLSDV YSESEFFRSG TGYLLHDLIS
YVGFKHGETD RKIILVGDPA QLPPVGMSVS PALDTEYLHK HLGLDAAEYE LKEVLRQKAD
SGIIRNVMPL RDSLSKGTFG SLSFEFDEDV LRLRADEVLP LYMAARSTGE ANIPIVITRS
NSEAASYNRA IRDALFPGRD FVAAGDRLIV TANAVVNGSF LANGEFVDVV DAETMVERRS
VNLRYRNEET GAVDVIEVSL VFRDIQITVS SPDGAETVLT AKILDDHLHD SGAGLDAAQQ
RALYVDFLKR HPDLKRGHDR ERLSQIIRQD PYFNALRVKF GYAVTCHKAQ GGEWGHVFVN
CPSGQNPRSA EYFRWLYTAM TRSSGKLYMI DPPEVRLKVA GPDWWSPSEV STTSTDGQLS
AAAQAGGTAS IISPQEAFRL GVLARVRDLL GETGIEIDDV AHHQYQEAFY LRRDLDTARA
NISYNGKFKV TAVAVPPAGA FSEQLGELLR PLVGQSIGSA LPVAGTGGSS GLQSPSRPFL
AQFHDRLLPL LRERQIHIVG LKEQAWSQRY TFSRGGDAAV VDVFYDGRDR FTKCMPINVG
GRQGVPAGTL LPEVLEILTA QVIP
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