Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3420 |
Symbol | |
ID | 5456783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3656471 |
End bp | 3657160 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640879009 |
Product | hypothetical protein |
Protein accession | YP_001414680 |
Protein GI | 154253856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.827841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.178813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTT TCAAGAACGA GATCACCCAC CTGCAGGCGC ACATTAAGAC GCTGCGCCTG GGCGCGGGCG CGCTGGTCAT CGTCGCGCTG GTCATGGGTG GCGGTTGGTG GAGTGCCCCG CGCGATCTGA CCATCCACGT CCCGCCTGAC CTGCGCTCCG GCAGCACCCG CAAGTGGTGG GAAGTGCCAC CCGAATCGGT CTATGCCTTC ACGTTCTACG TGTTCCAGCA GCTCAACCGC TGGCCGACCA ATGGCGAGGA AGACTACCCG CGCAACCTGC ACGCGCTCTC GCCATACCTC ACGCCAGCCT GTCACGCCTT TCTGCGTGCC GACTACGACT ACCGGCGCAG CACCGGCGAG CTGCGCCAGC GCGTGCGCGG CATCTATGAA ATCCCGGGCC GTGGTTATGG CGACGATCCC ACCGCCCGCG TGCGCGTCGT CTCCGACCGC GACTGGGTGG TGACGCTAGA CATCAGCGCC GACGAGTATT ACGGCGCTGA GCAGGTCAAG CGCGCCCTGG TGCGCTACCC CATCAAAGTC ACGCGGGTGG ACGTCGATCC CTCACGCAAC CCGTTCGGCC TGGCGCTCGA TTGCTACGAC GGCACGCCCC AGCGCATCAA CGTCCCGGAG CCGACGCGCC CGACATCTGG CAGGTTGCCT TCGCAAGCGC CTCAAGGAGA AACCCCATGA
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Protein sequence | MSRFKNEITH LQAHIKTLRL GAGALVIVAL VMGGGWWSAP RDLTIHVPPD LRSGSTRKWW EVPPESVYAF TFYVFQQLNR WPTNGEEDYP RNLHALSPYL TPACHAFLRA DYDYRRSTGE LRQRVRGIYE IPGRGYGDDP TARVRVVSDR DWVVTLDISA DEYYGAEQVK RALVRYPIKV TRVDVDPSRN PFGLALDCYD GTPQRINVPE PTRPTSGRLP SQAPQGETP
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