| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3410 |
|---|
| Symbol | |
|---|
| ID | 5456997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3649505 |
|---|
| End bp | 3650155 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640878999 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001414670 |
|---|
| Protein GI | 154253846 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.142493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.323994 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CGCGGTCTGC CCGGCGCTCG GCCGCCGCCG TGGTGGTGCA GAGCCTTCTG
TGGCTGTGGC TGATCGGCCT CAGCGTCTTC GTAGCTTTGG GCTACCAGAC CATGAACGAC
CAAGCCGACC AGGAGCGGCT CGATTCCCGC CTGCAACGCC TGGAAGCGCA GGCGACGGGC
CTGGCCGAGA CCATCGAGGC CATCCAGCAG CGTCCGGCCG TCGCAACGGC GGCAGACCTC
AAAGACACCC GCCAAGTCCT GGAAGCACGC GCTGCCCAAG TTGAGAAAAC GCTGAGCGGC
TATGCCGCTG CCGACGACCT CCAGGCGCTG CGCGCGGAGG TCGAGCAGAT CAAGGCGCGC
CAGACCGCTG CGCCTGTTCC GCGCGCCGCA GCACCCGCCC GGCGGCGCAC ATCGGGCAAG
GCCGTTGCCA AGCCCGAACC GCCGTCGCTG CCGTTCCGTG TCGTCGGCGC CGAATTGCGC
GCTGGCCAGC GCAGCGTGTC CGTCGCGCCG AGCAGCGCGG ACTCCACGCC CGACCAGCTT
CAGGTGCTGC TGCCAGGTGA TGCGCTCGGC CCGTGGCGCT TGCGGGCTGT CGAGGGCAAC
ACCGCCGTGT TCCTGGCCGG CGATCGGACC CGTCGCGTGG CGATTCCCTG A
|
|---|
| Protein sequence | MNAPRSARRS AAAVVVQSLL WLWLIGLSVF VALGYQTMND QADQERLDSR LQRLEAQATG
LAETIEAIQQ RPAVATAADL KDTRQVLEAR AAQVEKTLSG YAAADDLQAL RAEVEQIKAR
QTAAPVPRAA APARRRTSGK AVAKPEPPSL PFRVVGAELR AGQRSVSVAP SSADSTPDQL
QVLLPGDALG PWRLRAVEGN TAVFLAGDRT RRVAIP
|
|---|
| |