| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3338 |
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| Symbol | |
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| ID | 5455803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3575217 |
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| End bp | 3576383 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878928 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001414599 |
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| Protein GI | 154253775 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.303963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA GCCTGTCACG CTATCTGTTT TTCCAGACAC TCGGCCCCTT CGTCGTCGCG
AGCGTCGTGC TGAGCGGCAT CATCTGGCTT ACGCAGGCGC TGCGGATGCT CGACGTCCTC
ATCACGCAAG GACAGACGCT TCTCACCTTT TTCGAGCTGA CGGTGCTGGC GCTGCCAAGC
ACGCTGATGA TCGTGCTGCC GATTTCGCTT TTTTGCGCCG TGCTCTACTC CCTTCACAAG
CTTATCAGCG ACAGCGAAAT CGTCGTGATG TTTGCAGCCG GCGTCAGCCG CTGGGTGGTT
GCGCTGCCGC TGCTGGCGAT CGCGATGGGC ACCTCCGTCA TCATTCTCGC GTTCAGCATC
TATATCGCGC CGGCCGGGAT GCGCGAGTTG AAGAGCCGCC TGGTCGAAAT CCGCAGCGAC
GTCGCCACCG CGATGATCCG CGAGGGCACA TTCTCCAATC CGGCGACCGG CCTAACAGTA
TTCGTGCGCG AACGCGCCGC CGACGGAACC ACCTATGGCG TGCTGGTGCA TGACGGGCGC
ATTCCATCCG CGCCGGTTAC CTACATGGCG GAGACGGGGA GCCTTGTCAG GGGACCGAAC
GGGCCGCTGC TCGTCATGTT CAACGGAAAC ATCCAGCGCG CATCGCGCAG CGGCACGGAA
ACAAGCGCCG CGACATTTCT CTACTTCGAC AAATATACCT ACGACCTTTC GCAATACATG
GAAGACGAGC CGACGCTTTC ATATGAAGGG CGCGAGCGGT ATTTCCACGA GCTGGTCAAC
CCGGCCAGCG ACGATCTTTA CGGCCAGCAG AACCGCGACA AGCTTCTCGC CGACGCGCAT
GAAAGGCTGG TGGAAGGCTT CTATCCCGTG ATGCTGACGC TGATCGGGCT TGCGGCACTG
CTGCCGGCGC CTTTCAACCG GCGCGGATAT GCCTCGCGAA TGGCGACGGC GGCGGCCATG
GCGCTTACGG TTCGCATCCT CGGCTTCGCG CTTTCCAACG CGGTAGGGAA CAATCTCGCG
CTGGCGCCGC TCATGTATAT CCTTCCCATA GCGGTCTGCG GCATATGCCT TGCCGTGATC
GCGGGGGTCC GGTTCGACAT TCTGTGGCGC AGGCTTTCAC GCCGCATCCT GTCGGGGCGC
GCAGGGCAGA GCGGGGCCGC GCGATGA
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| Protein sequence | MLKSLSRYLF FQTLGPFVVA SVVLSGIIWL TQALRMLDVL ITQGQTLLTF FELTVLALPS
TLMIVLPISL FCAVLYSLHK LISDSEIVVM FAAGVSRWVV ALPLLAIAMG TSVIILAFSI
YIAPAGMREL KSRLVEIRSD VATAMIREGT FSNPATGLTV FVRERAADGT TYGVLVHDGR
IPSAPVTYMA ETGSLVRGPN GPLLVMFNGN IQRASRSGTE TSAATFLYFD KYTYDLSQYM
EDEPTLSYEG RERYFHELVN PASDDLYGQQ NRDKLLADAH ERLVEGFYPV MLTLIGLAAL
LPAPFNRRGY ASRMATAAAM ALTVRILGFA LSNAVGNNLA LAPLMYILPI AVCGICLAVI
AGVRFDILWR RLSRRILSGR AGQSGAAR
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