| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3272 |
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| Symbol | |
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| ID | 5454120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3497284 |
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| End bp | 3498663 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878863 |
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| Product | peptidase M23B |
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| Protein accession | YP_001414534 |
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| Protein GI | 154253710 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.790257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCAAC GGTCGGGCTG GGCCGATAAA TTCCGCAATT TTTTGCGTCA CATGTATGTG
GAGCGGCAGA TTTATATCCG CAGCCACGGG CATGTGCAGT TCATATCGCT GTCGCCGCTG
ACGCAGACCG TGTTCGCGAC GATTGCTTTC GTGTTCCTGA GCTGGATCGC GTTTTCCTCG
GTCAACGTGG TCTTCAAGGA ACAGATCATC GCCGCGAAAG ACCGGCGCTA CGTGAAGATG
CAGTCCGCTT ATGAAGAGCG GATGGCGCAA TTGCAGTCGG CTTACGACGA ACTCAACGGG
CAGCTGGTCA TTACGGAGGA GCGCTTCCTC GCCACGACGC GCCAGCTCGA GGACAAGCAC
AAGCAGCTTT CGGCGCTGAT GAGCCAGCGC CAGACCGCCG GATCGCAGCT CGACACGATG
CGCCGCCGCT ACGCCGCCAC GCTGCGCGGC CAGGGCAACG CCGAAAGCAG CAGCAATACC
GTGCTTATGC GCGTCGACGA GGCGTCGGAA GGCGCCGATA TCGTGCCGAC GAGCGAGCGG
CCGCAAAAGG CGGCGGAGCT CGACCGCTTC TTCATCGAGG CGACGGATGA CGGCGCGGTG
TTCGATATTG CGGGGCTGGC GGGCGCCGAG AGCAACCAAA ACGGTACGGT TTCCCAGATA
GATACGCGGC TTTCCCGCCT CGACACTGCG CAGCAGGGCC TCATCAACAA TGTCGAGGAG
ATCACGGACC GACGGGTGCG GGAGCTCAAA TCGATCATCG CGATGACCAA GGTGATCGAC
CCGGACGACC TGCTGAAGCG CGGCAGCAAG GCCCGGGACG ACGCCCAGGG CGGCCCCTTC
ATCAGCCTTG CAGACGCCGA CGCGCTGGCC GGCGGCGACG ATGAAACGGC CTTTCAACGG
CAGCTCTTCA GAGTAAGCCA GAACCTGAAG AAAATGGCCG ATCTTGAGGA TTCCATTGCC
AGAATGCCGC TCGCGGAGCC GCTTGTTTCC TACCGGAAAA CCAGCAGCTA TGGCGCCCGG
CGCGACCCCT TCAACGGCCG CATGGCCTTT CATTCCGGCG AGGACATGGC GGCCAGCTAT
GGTGCCCTGA TCTTCGCGCC GGGAGCCGGC ACGGTAAGCT ATGCGGGCTG GAAGGGCGGC
TATGGCAGGG TCATCGAAAT CGACCATGGG AACGGCTTCC GGACGCGCTA CGGGCATCTC
GGCAAGATCG ACGTCAAGGC TGGCCAGAAA ATTGCATTCC GTGAAGTCAT CGGCAAAGTA
GGGTCTTCTG GCCGCAGCAG CGGGCCCCAT CTTCACTATG AGGTCTGGTT CGACGGTATC
GTCCGCAACC CCTCCAAGTT CATTGAGGCA GGGCATTATG TTTTCGCGAA GCAAGGATAG
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| Protein sequence | MHQRSGWADK FRNFLRHMYV ERQIYIRSHG HVQFISLSPL TQTVFATIAF VFLSWIAFSS
VNVVFKEQII AAKDRRYVKM QSAYEERMAQ LQSAYDELNG QLVITEERFL ATTRQLEDKH
KQLSALMSQR QTAGSQLDTM RRRYAATLRG QGNAESSSNT VLMRVDEASE GADIVPTSER
PQKAAELDRF FIEATDDGAV FDIAGLAGAE SNQNGTVSQI DTRLSRLDTA QQGLINNVEE
ITDRRVRELK SIIAMTKVID PDDLLKRGSK ARDDAQGGPF ISLADADALA GGDDETAFQR
QLFRVSQNLK KMADLEDSIA RMPLAEPLVS YRKTSSYGAR RDPFNGRMAF HSGEDMAASY
GALIFAPGAG TVSYAGWKGG YGRVIEIDHG NGFRTRYGHL GKIDVKAGQK IAFREVIGKV
GSSGRSSGPH LHYEVWFDGI VRNPSKFIEA GHYVFAKQG
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