Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3235 |
Symbol | tig |
ID | 5453523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3453756 |
End bp | 3455294 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640878825 |
Product | trigger factor |
Protein accession | YP_001414497 |
Protein GI | 154253673 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.112931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.882786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAGG TCACGGTTAC AAACGCGGAC GGTCTGAAGC GCGAATTGAA GGTTCAGGTC CCCTCCCAGG AACTTGAAGC CAAACTCGGC GCCAAGTTGG ACGAGATGAA AAATCAGGTC CGCCTGAAGG GCTTCCGCCC GGGCAAGGTG CCGGTCAGTC ATCTCCGCAA GACCTTCGGC AAGCAGGTCA TGGGCGACGT CATCCAGGAA ACGGTTGGCG AGTCGAGCCA GCAGGCTCTT CAGGACGAAA GCCTCCGGCC GGCATTCCAG CCCTCCATCG ACCTCGAAGG CGAAATTCAG GACGTGCTGG ACGGCAAGGC CGACCTCACA TTCAAGATGA GCTTTGAAGT CATTCCGGCT TTTGAACTGT CGGACTTTTC AAAGGTTTCG CTCGAACGCC TCACTGCTGA AGTAAAAGAT GAGGACATCG ACGTCGCGCT GAAGCGCCTC GCCGAGAACC AGAAGAATTT CGAACCGCGT GAAGAGGGTG CCAAGGCCGA AACCGGCGAC CTGCTGACGA TCGATTTCGT CGGCAAGATC GACGGCGAAG CCTTTGAAGG CGGTTCCGCT GAAGACGCCA ATCTGGAAAT CGGCTCGGGC CGTTTCATCC CCGGCTTCGA GGAGCAGCTG GTCGGTGTGA AGGTCGGCGA CGAGACTCAG GTGAAGGTTG CTTTCCCCGC CGATTACGGC GCCGAGCATC TTGCCGGCAA GGATGCTGTC TTCGACGTCA AGGTGAAGGA AGTGAAGGCG CCCGCCGAAG TAAAGCTCGA TGACGAGCTG GCGAAGCGCT TCGGCCTCGA GAGCATGGAG AAGCTGCGCG AGGCGCTTGG CGAGCAGATG AAGGGCGAAT ATGCCCGGAT GTCCCGCATG CACCTGAAGC GCGCCATGCT GGACAAGCTG GACGAGCTGC ACAGCTTCGA GCTCCCGCCG ACAATGGTCG AGCAGGAGTT CCAGCAGATC TGGCAGCAGT TCGAGCACGA GCTGAGCCAC CAGAACAAGA CCGCGGCCGA TCTCGACGAG CCGGAGGAAG ACGTGCGGGC GGAATACCGC AAGATCGCCG AGCGCCGTGT CCGCCTCGGT CTCCTCCTTG CCGAGGTTGG CGAGAAGAAC AACATCACCG TGACCGAGCA GGAGCTGAAC CAGGCTCTCG CCGAGCGCGC TCGCCAGTTC CCGGGGCAGG AGCAGCAGCT CTATCGCTAC TTCCAGCAGA ACCCGCAGGC CATTCAGGAA CTGCGTGCGC CGATTTTTGA GGACAAGGTC GTCGACTTCA TCGCGGAACT CGCGAAGGTC GAGGACAAGG TGGTGAGCCG GGACGAGCTC TTTGCCGATC CCGATGCCGA CGAGCACGAG CATCACCATC ATGACCACGA TCATGATCAT GATCACGACC ATGACCATGA TCACGGCCAC GATCACGACC ACGGCGACGA GAAGCCGAAG AAGAAGCCTG CCGCAAAGAA GGCTGCCGCC AAGTCGGACG ACGGCGAGGC GAAGCCCGCC GCCAAGAAGG CGCCGGCCAA GAAGAAAAAA GAAGACTGA
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Protein sequence | MMQVTVTNAD GLKRELKVQV PSQELEAKLG AKLDEMKNQV RLKGFRPGKV PVSHLRKTFG KQVMGDVIQE TVGESSQQAL QDESLRPAFQ PSIDLEGEIQ DVLDGKADLT FKMSFEVIPA FELSDFSKVS LERLTAEVKD EDIDVALKRL AENQKNFEPR EEGAKAETGD LLTIDFVGKI DGEAFEGGSA EDANLEIGSG RFIPGFEEQL VGVKVGDETQ VKVAFPADYG AEHLAGKDAV FDVKVKEVKA PAEVKLDDEL AKRFGLESME KLREALGEQM KGEYARMSRM HLKRAMLDKL DELHSFELPP TMVEQEFQQI WQQFEHELSH QNKTAADLDE PEEDVRAEYR KIAERRVRLG LLLAEVGEKN NITVTEQELN QALAERARQF PGQEQQLYRY FQQNPQAIQE LRAPIFEDKV VDFIAELAKV EDKVVSRDEL FADPDADEHE HHHHDHDHDH DHDHDHDHGH DHDHGDEKPK KKPAAKKAAA KSDDGEAKPA AKKAPAKKKK ED
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